Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HSPE1P20-201ENST00000538133 289 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.75□□□□□ -1.97
XRCC1P18887 HMGB1P14-201ENST00000557424 591 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.75□□□□□ -1.97
XRCC1P18887 AL354943.1-201ENST00000572103 781 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.75□□□□□ -1.97
XRCC1P18887 AC107952.2-201ENST00000606048 486 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC005046.1-201ENST00000608515 625 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 TUSC7.1-201ENST00000610969 165 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AP003122.6-201ENST00000623831 495 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.75□□□□□ -1.97
XRCC1P18887 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.75□□□□□ -1.97
XRCC1P18887 AC009487.2-201ENST00000420969 6821 ntBASIC2.75□□□□□ -1.97
XRCC1P18887 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
XRCC1P18887 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
XRCC1P18887 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
XRCC1P18887 AC233263.6-201ENST00000631132 1963 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
XRCC1P18887 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
XRCC1P18887 SNORD113-6-201ENST00000363345 75 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 RNU6-777P-201ENST00000364265 104 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 RNU6-723P-201ENST00000383973 107 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AL590084.2-201ENST00000401481 382 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 RPL7L1P10-201ENST00000427790 463 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.74□□□□□ -1.97
XRCC1P18887 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.74□□□□□ -1.97
XRCC1P18887 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.74□□□□□ -1.97
XRCC1P18887 AC009237.8-201ENST00000445492 379 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AP000542.1-201ENST00000448473 371 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.74□□□□□ -1.97
XRCC1P18887 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.74□□□□□ -1.97
XRCC1P18887 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
XRCC1P18887 AC104685.1-201ENST00000502445 371 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AC147055.4-201ENST00000504399 745 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.74□□□□□ -1.97
XRCC1P18887 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.74□□□□□ -1.97
XRCC1P18887 MTCYBP43-201ENST00000513621 740 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 MTND5P4-201ENST00000514978 288 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AP000889.1-201ENST00000530968 660 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.74□□□□□ -1.97
XRCC1P18887 HPRT1P3-201ENST00000539521 576 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.74□□□□□ -1.97
XRCC1P18887 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.74□□□□□ -1.97
XRCC1P18887 MIR3609-201ENST00000582661 80 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.74□□□□□ -1.97
XRCC1P18887 AC079089.3-201ENST00000603094 673 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AL031281.1-201ENST00000604049 488 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 RPL23AP88-201ENST00000605759 454 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AP000240.1-201ENST00000609910 452 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AC013476.2-201ENST00000614456 459 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AC090132.2-201ENST00000615881 347 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.74□□□□□ -1.97
XRCC1P18887 AC023510.2-201ENST00000622162 746 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.74□□□□□ -1.97
XRCC1P18887 AC103706.2-201ENST00000638080 240 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AP003122.5-201ENST00000527668 3766 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 AL365361.1-201ENST00000566942 3481 ntBASIC2.74□□□□□ -1.97
XRCC1P18887 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
XRCC1P18887 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
XRCC1P18887 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
XRCC1P18887 RNU6-853P-201ENST00000364306 107 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 MIR514A1-201ENST00000385133 98 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 MIR1289-1-201ENST00000408836 144 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 RPL19P1-201ENST00000411635 428 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.73□□□□□ -1.97
XRCC1P18887 AC008850.1-201ENST00000427546 362 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 TAAR7P-201ENST00000436141 242 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 Z80107.1-201ENST00000436830 412 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 MTND2P24-201ENST00000453434 806 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.73□□□□□ -1.97
XRCC1P18887 SNORA59A-201ENST00000459326 152 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 MTND2P14-201ENST00000482139 351 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 AC098799.2-201ENST00000509466 868 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 RNU6-798P-201ENST00000516912 103 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.73□□□□□ -1.97
XRCC1P18887 OR7K1P-201ENST00000546439 926 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
XRCC1P18887 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.73□□□□□ -1.97
XRCC1P18887 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.73□□□□□ -1.97
XRCC1P18887 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.73□□□□□ -1.97
XRCC1P18887 AC106791.2-201ENST00000604680 391 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 HSPE1P7-201ENST00000604681 321 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 ATP1B3P1-201ENST00000605365 821 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.73□□□□□ -1.97
XRCC1P18887 AC019226.1-201ENST00000625666 515 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
XRCC1P18887 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.73□□□□□ -1.97
XRCC1P18887 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
XRCC1P18887 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms