Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 RPL9P7-201ENST00000330965 580 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 Y_RNA.218-201ENST00000364218 104 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 Y_RNA.569-201ENST00000384749 103 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 MIR186-201ENST00000384988 86 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 MIR569-201ENST00000385228 96 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMPD1P17405 RPS16P5-201ENST00000406501 404 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 HSPE1P8-201ENST00000406997 288 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 RNU2-50P-201ENST00000410494 143 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.67□□□□□ -1.5
SMPD1P17405 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.67□□□□□ -1.5
SMPD1P17405 AL513043.1-201ENST00000439124 535 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AC007395.1-201ENST00000451333 677 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.67□□□□□ -1.5
SMPD1P17405 RNU7-87P-201ENST00000459343 62 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 RN7SL481P-201ENST00000477764 299 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.67□□□□□ -1.5
SMPD1P17405 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SMPD1P17405 AP005660.1-201ENST00000522972 293 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.67□□□□□ -1.5
SMPD1P17405 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SMPD1P17405 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMPD1P17405 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.67□□□□□ -1.5
SMPD1P17405 MIR4679-2-201ENST00000578358 77 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 MIR3684-201ENST00000579779 74 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AL391358.1-201ENST00000605342 190 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.67□□□□□ -1.5
SMPD1P17405 TUG1_2.1-201ENST00000614234 87 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.67□□□□□ -1.5
SMPD1P17405 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMPD1P17405 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
SMPD1P17405 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.67□□□□□ -1.5
SMPD1P17405 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.67□□□□□ -1.5
SMPD1P17405 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMPD1P17405 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SMPD1P17405 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.67□□□□□ -1.5
SMPD1P17405 AC004158.1-201ENST00000564508 4319 ntBASIC5.67□□□□□ -1.5
SMPD1P17405 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMPD1P17405 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMPD1P17405 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 AC010332.2-201ENST00000613083 1904 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMPD1P17405 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 UBE2WP1-201ENST00000362030 340 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 SNORA2.3-201ENST00000383920 135 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 RNU6-514P-201ENST00000384208 107 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 RN7SKP17-201ENST00000411242 351 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 AC091390.1-201ENST00000433904 331 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 AC127537.2-201ENST00000439258 465 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 RPL26P6-201ENST00000440913 438 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.66□□□□□ -1.5
SMPD1P17405 AC010733.1-201ENST00000451515 401 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 AC010326.1-201ENST00000462726 602 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 RPL30P11-201ENST00000495304 339 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 MTND3P25-201ENST00000509243 135 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 RNA5SP272-201ENST00000516095 111 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 RN7SL802P-201ENST00000577858 299 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.66□□□□□ -1.5
SMPD1P17405 BRDTP1-201ENST00000605735 677 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 MIR6839-201ENST00000620425 113 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 AC008785.1-201ENST00000624475 456 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 AC009951.1-201ENST00000623674 2614 ntBASIC5.66□□□□□ -1.5
SMPD1P17405 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.66□□□□□ -1.5
SMPD1P17405 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
SMPD1P17405 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.66□□□□□ -1.5
SMPD1P17405 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMPD1P17405 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SMPD1P17405 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMPD1P17405 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMPD1P17405 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
SMPD1P17405 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
SMPD1P17405 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SMPD1P17405 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMPD1P17405 AC126755.2-208ENST00000327792 462 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 AC138969.1-213ENST00000331436 462 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 SNORA63.4-201ENST00000362763 126 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMPD1P17405 SNORA77-201ENST00000408716 125 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 AC119751.6-201ENST00000416712 186 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 RAB28P5-201ENST00000427490 651 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 AC004938.1-201ENST00000438468 308 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.65□□□□□ -1.5
SMPD1P17405 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.65□□□□□ -1.5
SMPD1P17405 AL162389.1-201ENST00000449233 177 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 AL137159.1-201ENST00000452808 512 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 AC079168.2-201ENST00000453977 416 ntBASIC5.65□□□□□ -1.5
SMPD1P17405 SNORD2.1-201ENST00000458762 69 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms