Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RPL21P6-201ENST00000479171 504 ntBASIC5.12□□□□□ -1.59
BMP3P12645 AC105137.1-201ENST00000484355 562 ntBASIC5.12□□□□□ -1.59
BMP3P12645 DEFB109F-201ENST00000491870 277 ntBASIC5.12□□□□□ -1.59
BMP3P12645 HMGB1P21-201ENST00000502313 581 ntBASIC5.12□□□□□ -1.59
BMP3P12645 RNA5SP446-201ENST00000515955 82 ntBASIC5.12□□□□□ -1.59
BMP3P12645 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.12□□□□□ -1.59
BMP3P12645 AP003385.6-201ENST00000531603 374 ntBASIC5.12□□□□□ -1.59
BMP3P12645 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.12□□□□□ -1.59
BMP3P12645 AL133271.1-201ENST00000538229 291 ntBASIC5.12□□□□□ -1.59
BMP3P12645 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.12□□□□□ -1.59
BMP3P12645 MTND4LP5-201ENST00000605152 292 ntBASIC5.12□□□□□ -1.59
BMP3P12645 AC096772.1-201ENST00000609146 564 ntBASIC5.12□□□□□ -1.59
BMP3P12645 U2.17-201ENST00000611454 95 ntBASIC5.12□□□□□ -1.59
BMP3P12645 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.12□□□□□ -1.59
BMP3P12645 AL590099.1-201ENST00000615276 138 ntBASIC5.12□□□□□ -1.59
BMP3P12645 AC091905.2-201ENST00000623143 306 ntBASIC5.12□□□□□ -1.59
BMP3P12645 MIR3653-201ENST00000625572 110 ntBASIC5.12□□□□□ -1.59
BMP3P12645 AC140479.6-201ENST00000633535 357 ntBASIC5.12□□□□□ -1.59
BMP3P12645 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BMP3P12645 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.12□□□□□ -1.59
BMP3P12645 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BMP3P12645 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
BMP3P12645 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.12□□□□□ -1.59
BMP3P12645 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
BMP3P12645 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
BMP3P12645 Z95327.2-201ENST00000414579 1873 ntBASIC5.11□□□□□ -1.59
BMP3P12645 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.11□□□□□ -1.59
BMP3P12645 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
BMP3P12645 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 RNU6-770P-201ENST00000363929 105 ntBASIC5.11□□□□□ -1.59
BMP3P12645 Y_RNA.276-201ENST00000364732 109 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNA5SP151-201ENST00000365632 117 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNU1-63P-201ENST00000383902 164 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNU6-1093P-201ENST00000391194 107 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNA5SP107-201ENST00000411358 122 ntBASIC5.11□□□□□ -1.59
BMP3P12645 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.11□□□□□ -1.59
BMP3P12645 PIGPP3-201ENST00000425307 415 ntBASIC5.11□□□□□ -1.59
BMP3P12645 AC093106.2-201ENST00000428212 385 ntBASIC5.11□□□□□ -1.59
BMP3P12645 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.11□□□□□ -1.59
BMP3P12645 EZH2P1-201ENST00000431167 291 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RPL23AP50-201ENST00000434149 455 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RPL23AP52-201ENST00000439311 478 ntBASIC5.11□□□□□ -1.59
BMP3P12645 NOTCH2P1-201ENST00000443481 624 ntBASIC5.11□□□□□ -1.59
BMP3P12645 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.11□□□□□ -1.59
BMP3P12645 FTH1P25-201ENST00000447665 469 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNU7-167P-201ENST00000459160 62 ntBASIC5.11□□□□□ -1.59
BMP3P12645 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.11□□□□□ -1.59
BMP3P12645 UQCRHP4-201ENST00000471686 272 ntBASIC5.11□□□□□ -1.59
BMP3P12645 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.11□□□□□ -1.59
BMP3P12645 PARP4P3-201ENST00000510265 317 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNU6-307P-201ENST00000516743 106 ntBASIC5.11□□□□□ -1.59
BMP3P12645 RNU6-182P-201ENST00000516970 105 ntBASIC5.11□□□□□ -1.59
BMP3P12645 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.11□□□□□ -1.59
BMP3P12645 AC091516.1-201ENST00000549191 703 ntBASIC5.11□□□□□ -1.59
BMP3P12645 AC005899.2-201ENST00000584353 90 ntBASIC5.11□□□□□ -1.59
BMP3P12645 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 AC009570.1-201ENST00000609599 745 ntBASIC5.11□□□□□ -1.59
BMP3P12645 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.11□□□□□ -1.59
BMP3P12645 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.11□□□□□ -1.59
BMP3P12645 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
BMP3P12645 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
BMP3P12645 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.1□□□□□ -1.59
BMP3P12645 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
BMP3P12645 RNU6-1059P-201ENST00000363752 98 ntBASIC5.1□□□□□ -1.59
BMP3P12645 RNU6-1293P-201ENST00000384077 107 ntBASIC5.1□□□□□ -1.59
BMP3P12645 Y_RNA.785-201ENST00000384290 109 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AL445529.1-201ENST00000398713 389 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC069218.2-201ENST00000411665 344 ntBASIC5.1□□□□□ -1.59
BMP3P12645 RPS20P14-201ENST00000412545 360 ntBASIC5.1□□□□□ -1.59
BMP3P12645 GSTM3P2-201ENST00000412746 530 ntBASIC5.1□□□□□ -1.59
BMP3P12645 ELOCP20-201ENST00000422460 345 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC097063.1-201ENST00000426714 1797 ntBASIC5.1□□□□□ -1.59
BMP3P12645 CALM2P2-201ENST00000428512 440 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 AC005094.1-201ENST00000440420 368 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC011816.1-201ENST00000441346 546 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 RN7SL812P-201ENST00000493791 279 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC026801.1-201ENST00000497178 464 ntBASIC5.1□□□□□ -1.59
BMP3P12645 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.1□□□□□ -1.59
BMP3P12645 AC022447.4-201ENST00000504053 364 ntBASIC5.1□□□□□ -1.59
BMP3P12645 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.1□□□□□ -1.59
BMP3P12645 Y_RNA.673-201ENST00000516306 88 ntBASIC5.1□□□□□ -1.59
BMP3P12645 SNORA31.9-201ENST00000516429 84 ntBASIC5.1□□□□□ -1.59
BMP3P12645 RNU6-347P-201ENST00000516658 105 ntBASIC5.1□□□□□ -1.59
BMP3P12645 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.1□□□□□ -1.59
BMP3P12645 AC022080.3-201ENST00000544433 482 ntBASIC5.1□□□□□ -1.59
BMP3P12645 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms