Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
PCNAP12004 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.49□□□□□ -1.85
PCNAP12004 RNU6-511P-201ENST00000363496 107 ntBASIC3.49□□□□□ -1.85
PCNAP12004 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.49□□□□□ -1.85
PCNAP12004 GSTA9P-201ENST00000406231 611 ntBASIC3.49□□□□□ -1.85
PCNAP12004 RNU2-62P-201ENST00000410868 191 ntBASIC3.49□□□□□ -1.85
PCNAP12004 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.49□□□□□ -1.85
PCNAP12004 DPPA2P1-201ENST00000428060 556 ntBASIC3.49□□□□□ -1.85
PCNAP12004 MTATP6P30-201ENST00000443540 664 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.49□□□□□ -1.85
PCNAP12004 SNRPGP6-201ENST00000451124 220 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.49□□□□□ -1.85
PCNAP12004 MTCO2P29-201ENST00000465212 189 ntBASIC3.49□□□□□ -1.85
PCNAP12004 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 RPL7P5-201ENST00000471472 736 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.49□□□□□ -1.85
PCNAP12004 RPS3AP14-201ENST00000483907 780 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.49□□□□□ -1.85
PCNAP12004 AC026402.1-201ENST00000513642 170 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.49□□□□□ -1.85
PCNAP12004 SCARNA24.1-201ENST00000516465 137 ntBASIC3.49□□□□□ -1.85
PCNAP12004 RNU6-840P-201ENST00000517275 65 ntBASIC3.49□□□□□ -1.85
PCNAP12004 FAM92A1P1-201ENST00000528023 890 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.49□□□□□ -1.85
PCNAP12004 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.49□□□□□ -1.85
PCNAP12004 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.49□□□□□ -1.85
PCNAP12004 AL390240.1-201ENST00000612950 384 ntBASIC3.49□□□□□ -1.85
PCNAP12004 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.49□□□□□ -1.85
PCNAP12004 OR5H6-203ENST00000642105 978 ntBASIC3.49□□□□□ -1.85
PCNAP12004 AC005832.2-201ENST00000538921 1430 ntBASIC3.49□□□□□ -1.85
PCNAP12004 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCNAP12004 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 FAM35CP-201ENST00000554755 2470 ntBASIC3.48□□□□□ -1.85
PCNAP12004 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 SNORD56.2-201ENST00000363242 71 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AC110754.1-201ENST00000399740 601 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AL136116.1-201ENST00000403591 381 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AC006989.1-201ENST00000427212 131 ntBASIC3.48□□□□□ -1.85
PCNAP12004 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.48□□□□□ -1.85
PCNAP12004 AC093156.1-201ENST00000440382 670 ntBASIC3.48□□□□□ -1.85
PCNAP12004 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 AC016696.1-201ENST00000446949 318 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 AL136380.1-201ENST00000447970 162 ntBASIC3.48□□□□□ -1.85
PCNAP12004 SSXP4-201ENST00000451349 245 ntBASIC3.48□□□□□ -1.85
PCNAP12004 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 MRPS31P2-201ENST00000451581 518 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 AL049874.1-201ENST00000489560 388 ntBASIC3.48□□□□□ -1.85
PCNAP12004 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PCNAP12004 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.48□□□□□ -1.85
PCNAP12004 AC090572.1-201ENST00000519251 160 ntBASIC3.48□□□□□ -1.85
PCNAP12004 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AC007991.1-201ENST00000522680 631 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.48□□□□□ -1.85
PCNAP12004 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 OR4H12P-201ENST00000556269 907 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.48□□□□□ -1.85
PCNAP12004 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 GLUD1P4-201ENST00000590914 418 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.48□□□□□ -1.85
PCNAP12004 AC025165.5-201ENST00000602802 578 ntBASIC3.48□□□□□ -1.85
PCNAP12004 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.48□□□□□ -1.85
PCNAP12004 RNU1-30P-201ENST00000606575 163 ntBASIC3.48□□□□□ -1.85
PCNAP12004 MIR6863-201ENST00000636112 90 ntBASIC3.48□□□□□ -1.85
PCNAP12004 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.48□□□□□ -1.85
PCNAP12004 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCNAP12004 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCNAP12004 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCNAP12004 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCNAP12004 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCNAP12004 AC092435.3-201ENST00000565538 3654 ntBASIC3.47□□□□□ -1.85
PCNAP12004 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PCNAP12004 CR848007.1-201ENST00000442354 1699 ntBASIC3.47□□□□□ -1.85
PCNAP12004 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCNAP12004 RNU5A-1-201ENST00000362698 116 ntBASIC3.47□□□□□ -1.85
PCNAP12004 RN7SKP280-201ENST00000364196 304 ntBASIC3.47□□□□□ -1.85
PCNAP12004 U3.11-201ENST00000364476 212 ntBASIC3.47□□□□□ -1.85
PCNAP12004 SNORA36C-201ENST00000384289 132 ntBASIC3.47□□□□□ -1.85
PCNAP12004 RNU6-517P-201ENST00000384362 110 ntBASIC3.47□□□□□ -1.85
PCNAP12004 SNORA57.1-201ENST00000391227 145 ntBASIC3.47□□□□□ -1.85
PCNAP12004 TXNP7-201ENST00000406296 293 ntBASIC3.47□□□□□ -1.85
PCNAP12004 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.47□□□□□ -1.85
PCNAP12004 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.47□□□□□ -1.85
PCNAP12004 AC245054.1-201ENST00000420944 258 ntBASIC3.47□□□□□ -1.85
PCNAP12004 GOT2P5-201ENST00000433995 546 ntBASIC3.47□□□□□ -1.85
PCNAP12004 MTND1P4-201ENST00000435196 415 ntBASIC3.47□□□□□ -1.85
PCNAP12004 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.47□□□□□ -1.85
PCNAP12004 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.47□□□□□ -1.85
PCNAP12004 HIGD1AP11-201ENST00000438361 280 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms