Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ART2BP-201ENST00000453501 499 ntBASIC3.08□□□□□ -1.92
VIMP08670 BZW1P2-201ENST00000473537 826 ntBASIC3.08□□□□□ -1.92
VIMP08670 RPS20P22-201ENST00000473700 357 ntBASIC3.08□□□□□ -1.92
VIMP08670 RPL23AP11-201ENST00000475260 469 ntBASIC3.08□□□□□ -1.92
VIMP08670 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
VIMP08670 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VIMP08670 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.08□□□□□ -1.92
VIMP08670 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.08□□□□□ -1.92
VIMP08670 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.08□□□□□ -1.92
VIMP08670 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.08□□□□□ -1.92
VIMP08670 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.08□□□□□ -1.92
VIMP08670 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.08□□□□□ -1.92
VIMP08670 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.08□□□□□ -1.92
VIMP08670 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.08□□□□□ -1.92
VIMP08670 AC123904.2-201ENST00000548059 300 ntBASIC3.08□□□□□ -1.92
VIMP08670 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.08□□□□□ -1.92
VIMP08670 NUTF2P8-201ENST00000604593 363 ntBASIC3.08□□□□□ -1.92
VIMP08670 RPL23AP88-201ENST00000605759 454 ntBASIC3.08□□□□□ -1.92
VIMP08670 AC245517.5-201ENST00000611529 162 ntBASIC3.08□□□□□ -1.92
VIMP08670 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.08□□□□□ -1.92
VIMP08670 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.08□□□□□ -1.92
VIMP08670 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.08□□□□□ -1.92
VIMP08670 AC079416.3-201ENST00000624479 549 ntBASIC3.08□□□□□ -1.92
VIMP08670 AC093591.3-201ENST00000634516 308 ntBASIC3.08□□□□□ -1.92
VIMP08670 MTND1P37-201ENST00000636562 264 ntBASIC3.08□□□□□ -1.92
VIMP08670 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VIMP08670 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.07□□□□□ -1.92
VIMP08670 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VIMP08670 SNORD56.5-201ENST00000364281 72 ntBASIC3.07□□□□□ -1.92
VIMP08670 RNU2-33P-201ENST00000410344 192 ntBASIC3.07□□□□□ -1.92
VIMP08670 RN7SKP220-201ENST00000410611 288 ntBASIC3.07□□□□□ -1.92
VIMP08670 RPL7P8-201ENST00000411964 730 ntBASIC3.07□□□□□ -1.92
VIMP08670 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
VIMP08670 USP9YP26-201ENST00000421008 661 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC092047.1-201ENST00000424997 240 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.07□□□□□ -1.92
VIMP08670 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.07□□□□□ -1.92
VIMP08670 AC073063.1-201ENST00000434352 607 ntBASIC3.07□□□□□ -1.92
VIMP08670 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.07□□□□□ -1.92
VIMP08670 TIMM9P1-201ENST00000436122 256 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.07□□□□□ -1.92
VIMP08670 NUTF2P7-201ENST00000453086 375 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.07□□□□□ -1.92
VIMP08670 AC108059.3-201ENST00000456388 214 ntBASIC3.07□□□□□ -1.92
VIMP08670 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.07□□□□□ -1.92
VIMP08670 RPL30P6-201ENST00000475925 342 ntBASIC3.07□□□□□ -1.92
VIMP08670 RPS27AP9-201ENST00000477681 438 ntBASIC3.07□□□□□ -1.92
VIMP08670 DSTNP2-201ENST00000504533 515 ntBASIC3.07□□□□□ -1.92
VIMP08670 AF131216.2-201ENST00000512316 564 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC093012.1-202ENST00000549403 582 ntBASIC3.07□□□□□ -1.92
VIMP08670 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.07□□□□□ -1.92
VIMP08670 AC068135.2-201ENST00000569293 1028 ntBASIC3.07□□□□□ -1.92
VIMP08670 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.07□□□□□ -1.92
VIMP08670 MIR4293-201ENST00000584305 78 ntBASIC3.07□□□□□ -1.92
VIMP08670 MIR4276-201ENST00000584832 70 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.07□□□□□ -1.92
VIMP08670 AC067959.1-201ENST00000604334 379 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC108747.1-201ENST00000609508 535 ntBASIC3.07□□□□□ -1.92
VIMP08670 AC103710.1-201ENST00000610003 901 ntBASIC3.07□□□□□ -1.92
VIMP08670 SNHG22-203ENST00000617833 660 ntBASIC3.07□□□□□ -1.92
VIMP08670 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VIMP08670 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
VIMP08670 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VIMP08670 RNU6-799P-201ENST00000363567 107 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNU6-553P-201ENST00000364047 96 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNU6-198P-201ENST00000384258 104 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL359634.1-202ENST00000404721 284 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNU4-72P-201ENST00000410754 173 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNU6-920P-201ENST00000410926 92 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 RPL7P34-201ENST00000433316 712 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
VIMP08670 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VIMP08670 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 DDX3P2-201ENST00000446138 111 ntBASIC3.06□□□□□ -1.92
VIMP08670 AC020550.1-201ENST00000447385 163 ntBASIC3.06□□□□□ -1.92
VIMP08670 EPS15P1-201ENST00000448836 336 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.06□□□□□ -1.92
VIMP08670 AC110794.1-201ENST00000505816 425 ntBASIC3.06□□□□□ -1.92
VIMP08670 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.06□□□□□ -1.92
VIMP08670 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 RNU1-95P-201ENST00000516357 160 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNU1-128P-201ENST00000516704 160 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
VIMP08670 RNA5SP291-201ENST00000517222 105 ntBASIC3.06□□□□□ -1.92
VIMP08670 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.06□□□□□ -1.92
VIMP08670 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 DUXAP5-201ENST00000529668 529 ntBASIC3.06□□□□□ -1.92
VIMP08670 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.06□□□□□ -1.92
VIMP08670 AC145350.1-201ENST00000567426 208 ntBASIC3.06□□□□□ -1.92
VIMP08670 AP001981.2-201ENST00000603241 418 ntBASIC3.06□□□□□ -1.92
VIMP08670 DPPA3P3-201ENST00000603842 430 ntBASIC3.06□□□□□ -1.92
VIMP08670 AC105129.3-201ENST00000605455 485 ntBASIC3.06□□□□□ -1.92
VIMP08670 AC073657.2-201ENST00000605661 303 ntBASIC3.06□□□□□ -1.92
VIMP08670 AL020991.1-201ENST00000612314 373 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms