Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 UBE2L4-201ENST00000587688 464 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 NUTF2P8-201ENST00000604593 363 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL035413.2-201ENST00000604801 525 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL137843.1-201ENST00000605078 385 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC092106.3-201ENST00000611308 722 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC016597.2-201ENST00000613256 341 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AL158801.5-201ENST00000623123 465 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AP000676.4-201ENST00000624659 623 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.27□□□□□ -2.05
HLA-DPB1P04440 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.27□□□□□ -2.05
HLA-DPB1P04440 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 SNORA5B-201ENST00000363786 132 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 RNU6-83P-201ENST00000384568 112 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 U3.26-201ENST00000391236 204 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AL360182.1-201ENST00000397433 468 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AL122016.1-201ENST00000403365 367 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 PIGPP2-201ENST00000411569 458 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC084290.1-201ENST00000434995 374 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC093281.2-201ENST00000510153 597 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 SCARNA1-201ENST00000517138 166 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 CKS1BP7-201ENST00000522230 235 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC087241.2-201ENST00000535801 324 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 VN1R92P-201ENST00000598511 928 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AL596327.1-201ENST00000603629 213 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC112220.3-201ENST00000605502 502 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AC004696.1-201ENST00000614345 607 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 AL136981.2-201ENST00000617319 734 ntBASIC2.26□□□□□ -2.05
HLA-DPB1P04440 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DPB1P04440 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC092447.10-201ENST00000620607 1652 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 SNORA4.1-201ENST00000364263 144 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 RNU6-637P-201ENST00000384050 107 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 MIR9-1-201ENST00000385198 89 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC080125.1-201ENST00000414888 684 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 MTCO2P17-201ENST00000424336 677 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC234781.2-201ENST00000426370 994 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC091390.3-201ENST00000426478 338 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 ARL5AP4-201ENST00000430731 512 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC129850.1-201ENST00000436203 508 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 SNRPEP7-201ENST00000438350 220 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC009237.8-201ENST00000445492 379 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AP000542.1-201ENST00000448473 371 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AP001486.1-201ENST00000463339 476 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC133134.1-201ENST00000466800 359 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 SETP11-201ENST00000473027 690 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC104563.1-201ENST00000476147 376 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 GTF2IP9-201ENST00000502460 301 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 DSTNP2-201ENST00000504533 515 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 ARL4AP2-201ENST00000507378 601 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 MTCYBP43-201ENST00000513621 740 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 SCARNA15.2-201ENST00000516409 127 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 SNORA31.11-201ENST00000516528 139 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 RNU6-56P-201ENST00000516986 93 ntBASIC2.25□□□□□ -2.05
HLA-DPB1P04440 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DPB1P04440 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms