Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AL391261.3-201ENST00000557194 520 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AC009097.3-201ENST00000563557 1018 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.25□□□□□ -2.05
VAPBO95292 AC122134.1-202ENST00000569111 1201 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.25□□□□□ -2.05
VAPBO95292 AL161729.4-201ENST00000604650 476 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AC103710.4-201ENST00000609301 899 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AC008498.1-201ENST00000613012 531 ntBASIC2.25□□□□□ -2.05
VAPBO95292 MIR6895-201ENST00000613497 78 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.25□□□□□ -2.05
VAPBO95292 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AL157770.1-201ENST00000623049 439 ntBASIC2.25□□□□□ -2.05
VAPBO95292 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.25□□□□□ -2.05
VAPBO95292 MIR1322-201ENST00000638013 71 ntBASIC2.25□□□□□ -2.05
VAPBO95292 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
VAPBO95292 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.25□□□□□ -2.05
VAPBO95292 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
VAPBO95292 RNU6-207P-201ENST00000384137 107 ntBASIC2.24□□□□□ -2.05
VAPBO95292 MIR524-201ENST00000385242 87 ntBASIC2.24□□□□□ -2.05
VAPBO95292 HMGB1P17-201ENST00000403495 628 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AL592310.1-201ENST00000414330 671 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPBO95292 LUZP4P1-201ENST00000415420 344 ntBASIC2.24□□□□□ -2.05
VAPBO95292 HMGB1P49-201ENST00000418882 569 ntBASIC2.24□□□□□ -2.05
VAPBO95292 SEPT2P1-201ENST00000419651 180 ntBASIC2.24□□□□□ -2.05
VAPBO95292 PPP1R11P2-201ENST00000423543 382 ntBASIC2.24□□□□□ -2.05
VAPBO95292 MTCO3P30-201ENST00000426425 670 ntBASIC2.24□□□□□ -2.05
VAPBO95292 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPBO95292 AC093155.1-201ENST00000440164 826 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPBO95292 PIGFP3-201ENST00000441918 722 ntBASIC2.24□□□□□ -2.05
VAPBO95292 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPBO95292 RPL31P50-201ENST00000471002 296 ntBASIC2.24□□□□□ -2.05
VAPBO95292 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
VAPBO95292 OR8K2P-201ENST00000524645 927 ntBASIC2.24□□□□□ -2.05
VAPBO95292 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.24□□□□□ -2.05
VAPBO95292 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPBO95292 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.24□□□□□ -2.05
VAPBO95292 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPBO95292 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPBO95292 HMGN2P15-201ENST00000585707 270 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AC068313.1-201ENST00000604028 1008 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AL583856.2-201ENST00000606298 543 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AL449363.1-201ENST00000617815 186 ntBASIC2.24□□□□□ -2.05
VAPBO95292 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.24□□□□□ -2.05
VAPBO95292 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.24□□□□□ -2.05
VAPBO95292 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VAPBO95292 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VAPBO95292 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.24□□□□□ -2.05
VAPBO95292 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
VAPBO95292 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPBO95292 SNRPEP3-201ENST00000338402 276 ntBASIC2.23□□□□□ -2.05
VAPBO95292 RNU6-28P-201ENST00000362378 107 ntBASIC2.23□□□□□ -2.05
VAPBO95292 RNU6-216P-201ENST00000363282 104 ntBASIC2.23□□□□□ -2.05
VAPBO95292 SNORA67.4-201ENST00000384688 142 ntBASIC2.23□□□□□ -2.05
VAPBO95292 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.23□□□□□ -2.05
VAPBO95292 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.23□□□□□ -2.05
VAPBO95292 MTCO2P5-201ENST00000422621 426 ntBASIC2.23□□□□□ -2.05
VAPBO95292 ZNF863P-201ENST00000426746 417 ntBASIC2.23□□□□□ -2.05
VAPBO95292 MTCO1P3-201ENST00000429327 192 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AC007919.1-201ENST00000429380 217 ntBASIC2.23□□□□□ -2.05
VAPBO95292 BNIP3P2-201ENST00000441221 577 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPBO95292 AC233279.1-201ENST00000455300 423 ntBASIC2.23□□□□□ -2.05
VAPBO95292 TMEM251P1-201ENST00000503717 318 ntBASIC2.23□□□□□ -2.05
VAPBO95292 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.23□□□□□ -2.05
VAPBO95292 BTF3P12-201ENST00000519620 469 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.23□□□□□ -2.05
VAPBO95292 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPBO95292 MIR5694-201ENST00000581190 76 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPBO95292 AC007938.3-201ENST00000604965 623 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AL158211.4-201ENST00000606988 584 ntBASIC2.23□□□□□ -2.05
VAPBO95292 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.23□□□□□ -2.05
VAPBO95292 AC005332.6-201ENST00000613178 446 ntBASIC2.23□□□□□ -2.05
VAPBO95292 HMGB1P24-202ENST00000615653 685 ntBASIC2.23□□□□□ -2.05
VAPBO95292 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC2.23□□□□□ -2.05
VAPBO95292 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VAPBO95292 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VAPBO95292 AC009902.3-201ENST00000606235 2172 ntBASIC2.23□□□□□ -2.05
VAPBO95292 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VAPBO95292 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
VAPBO95292 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.22□□□□□ -2.05
VAPBO95292 RNU6-217P-201ENST00000384164 104 ntBASIC2.22□□□□□ -2.05
VAPBO95292 Y_RNA.510-201ENST00000384511 114 ntBASIC2.22□□□□□ -2.05
VAPBO95292 MIR221-201ENST00000385135 110 ntBASIC2.22□□□□□ -2.05
VAPBO95292 RPL22P22-201ENST00000395439 379 ntBASIC2.22□□□□□ -2.05
VAPBO95292 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.22□□□□□ -2.05
VAPBO95292 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.22□□□□□ -2.05
VAPBO95292 MORF4L1P6-201ENST00000418771 268 ntBASIC2.22□□□□□ -2.05
VAPBO95292 Z82209.1-201ENST00000422141 2135 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AC092047.1-201ENST00000424997 240 ntBASIC2.22□□□□□ -2.05
VAPBO95292 UBE2D3P3-201ENST00000426992 425 ntBASIC2.22□□□□□ -2.05
VAPBO95292 FO393414.1-201ENST00000428697 1184 ntBASIC2.22□□□□□ -2.05
VAPBO95292 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.22□□□□□ -2.05
VAPBO95292 COX6CP12-201ENST00000446748 202 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
VAPBO95292 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms