Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 RPL36P19-201ENST00000430744 301 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.45□□□□□ -2.18
SNRNP200O75643 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.45□□□□□ -2.18
SNRNP200O75643 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.45□□□□□ -2.18
SNRNP200O75643 PSPHP1-201ENST00000450062 261 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.45□□□□□ -2.18
SNRNP200O75643 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.45□□□□□ -2.18
SNRNP200O75643 RNA5SP471-201ENST00000516971 106 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 C1DP5-201ENST00000525775 383 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 NDUFS5P6-201ENST00000529136 295 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 GLYCAM1-201ENST00000546596 285 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.45□□□□□ -2.18
SNRNP200O75643 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.45□□□□□ -2.18
SNRNP200O75643 OR4G1P-201ENST00000588632 938 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 AC007229.1-201ENST00000590455 412 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 AC092474.3-201ENST00000603022 568 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 AC055876.5-201ENST00000605667 259 ntBASIC1.45□□□□□ -2.18
SNRNP200O75643 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.45□□□□□ -2.18
SNRNP200O75643 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SNRNP200O75643 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.44□□□□□ -2.18
SNRNP200O75643 Z82195.2-201ENST00000612348 18351 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 RNU6-1249P-201ENST00000363237 111 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.44□□□□□ -2.18
SNRNP200O75643 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AL500527.1-201ENST00000448532 255 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.44□□□□□ -2.18
SNRNP200O75643 PMCHL2-203ENST00000457791 237 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AC104057.1-201ENST00000515547 497 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AC118942.1-201ENST00000529674 1035 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SNRNP200O75643 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.44□□□□□ -2.18
SNRNP200O75643 RPS3AP4-201ENST00000555161 764 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 SNORD53B-201ENST00000577887 78 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AC107214.2-201ENST00000608204 634 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
SNRNP200O75643 AL589994.2-201ENST00000621124 579 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 AC097372.4-201ENST00000625025 466 ntBASIC1.44□□□□□ -2.18
SNRNP200O75643 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.44□□□□□ -2.18
SNRNP200O75643 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
SNRNP200O75643 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.44□□□□□ -2.18
SNRNP200O75643 HMGB1P5-201ENST00000255320 642 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 SNORA38-201ENST00000363946 132 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 Y_RNA.493-201ENST00000384422 102 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 MTCO3P12-201ENST00000416718 547 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AL445687.1-201ENST00000439946 251 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP200O75643 RPL23AP76-201ENST00000441860 458 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP200O75643 RPL7P18-201ENST00000478965 734 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SNRNP200O75643 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.43□□□□□ -2.18
SNRNP200O75643 uc_338.20-201ENST00000621563 178 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 DUXAP9-208ENST00000622815 614 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.43□□□□□ -2.18
SNRNP200O75643 AC116618.1-201ENST00000634617 774 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
SNRNP200O75643 MTND4P8-201ENST00000514997 1362 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 RNU6-482P-201ENST00000391068 107 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 LINC01347-201ENST00000417964 355 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP200O75643 RPL35AP22-201ENST00000436855 335 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 OR6K5P-201ENST00000447050 945 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.43□□□□□ -2.18
SNRNP200O75643 SNRPFP4-201ENST00000456366 242 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 RPS20P24-201ENST00000457473 361 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP200O75643 PRELID3BP4-201ENST00000515476 571 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.43□□□□□ -2.18
SNRNP200O75643 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.43□□□□□ -2.18
SNRNP200O75643 AC012360.2-201ENST00000609349 391 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 AC090116.1-201ENST00000615679 446 ntBASIC1.43□□□□□ -2.18
SNRNP200O75643 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.43□□□□□ -2.18
SNRNP200O75643 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.42□□□□□ -2.18
SNRNP200O75643 RNU6-452P-201ENST00000384406 107 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 SNORA46.1-201ENST00000391069 153 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 U3.29-201ENST00000391296 212 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC010385.1-201ENST00000412374 256 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 ZNF965P-201ENST00000432501 817 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC092685.1-201ENST00000447960 1243 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.42□□□□□ -2.18
SNRNP200O75643 RNA5SP233-201ENST00000459153 113 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC025181.1-201ENST00000477507 416 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC109464.2-201ENST00000510242 943 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.42□□□□□ -2.18
SNRNP200O75643 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.42□□□□□ -2.18
SNRNP200O75643 LINC00933-203ENST00000559812 219 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.42□□□□□ -2.18
SNRNP200O75643 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.42□□□□□ -2.18
SNRNP200O75643 UCA1.1-201ENST00000620952 75 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AL360181.4-201ENST00000621752 134 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.42□□□□□ -2.18
SNRNP200O75643 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SNRNP200O75643 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SNRNP200O75643 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.42□□□□□ -2.18
SNRNP200O75643 RNU6-60P-201ENST00000364792 103 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 RNA5SP363-201ENST00000365072 115 ntBASIC1.42□□□□□ -2.18
SNRNP200O75643 RNU6-920P-201ENST00000410926 92 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms