Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCD1O75127 AL138785.1-201ENST00000425821 331 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 RPL7P28-201ENST00000437739 740 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCD1O75127 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCD1O75127 AC079140.5-201ENST00000507882 310 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 MRPS35P2-201ENST00000508242 191 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCD1O75127 Y_RNA.689-201ENST00000516589 107 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 MIR4429-201ENST00000580105 73 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 MIR5692C1-201ENST00000585309 91 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AC067852.4-201ENST00000590314 478 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AC012669.1-201ENST00000603209 283 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AC018889.1-201ENST00000605372 397 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCD1O75127 AC107871.2-201ENST00000612894 502 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 PISRT1.1-201ENST00000616930 107 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 CDC27P3-201ENST00000635418 1910 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCD1O75127 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTCD1O75127 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCD1O75127 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCD1O75127 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTCD1O75127 KPNA2P1-201ENST00000458289 1591 ntBASIC5.67□□□□□ -1.5
PTCD1O75127 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCD1O75127 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCD1O75127 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCD1O75127 MFSD8-242ENST00000641690 4199 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AL731532.2-201ENST00000623542 1953 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTCD1O75127 AL672167.1-203ENST00000641299 2975 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCD1O75127 AL137003.2-201ENST00000606924 2538 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 SNORA23-201ENST00000365128 182 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RNU6-190P-201ENST00000384154 102 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AL592291.1-201ENST00000403830 352 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 PPIAP31-201ENST00000405422 495 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RPS20P14-201ENST00000412545 360 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RPLP0P7-201ENST00000416050 667 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RPL21P109-201ENST00000422213 475 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AC018865.2-201ENST00000423631 129 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AL117339.2-201ENST00000430475 180 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCD1O75127 NEFMP1-201ENST00000443423 1006 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCD1O75127 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
PTCD1O75127 PPP1R11P1-201ENST00000486095 376 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RNA5SP497-201ENST00000516081 97 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 SNORA14.1-201ENST00000516113 141 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RNU6-1143P-201ENST00000516125 104 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RNU6-1332P-201ENST00000516666 104 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 RNU6-1016P-201ENST00000516689 94 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCD1O75127 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.66□□□□□ -1.5
PTCD1O75127 AL354984.3-201ENST00000604803 325 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTCD1O75127 MIR6130-201ENST00000619419 109 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AC112484.5-201ENST00000624189 228 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 AL031595.2-201ENST00000624215 19071 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCD1O75127 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCD1O75127 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
PTCD1O75127 AP000542.2-201ENST00000623199 6179 ntBASIC5.66□□□□□ -1.5
PTCD1O75127 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PTCD1O75127 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCD1O75127 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
PTCD1O75127 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
PTCD1O75127 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCD1O75127 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCD1O75127 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCD1O75127 RNU6-593P-201ENST00000364716 112 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 RNU6-715P-201ENST00000365204 103 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCD1O75127 RNU6-1040P-201ENST00000383974 107 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 SNORA75B-201ENST00000384053 137 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 RNU6-434P-201ENST00000384376 107 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 EIF4A1P3-201ENST00000411521 244 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 AL356095.1-201ENST00000417217 199 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCD1O75127 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCD1O75127 AC004866.2-201ENST00000438285 481 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 RNU7-167P-201ENST00000459160 62 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 AC012158.1-204ENST00000483430 465 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PTCD1O75127 Y_RNA.680-201ENST00000516441 93 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.65□□□□□ -1.5
PTCD1O75127 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.65□□□□□ -1.5
PTCD1O75127 AC018462.2-201ENST00000605375 395 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 AC004696.1-201ENST00000614345 607 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCD1O75127 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
PTCD1O75127 AC098657.3-201ENST00000620434 263 ntBASIC5.65□□□□□ -1.5
PTCD1O75127 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.65□□□□□ -1.51
PTCD1O75127 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PTCD1O75127 AP000432.2-201ENST00000624164 2048 ntBASIC5.65□□□□□ -1.51
PTCD1O75127 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
PTCD1O75127 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTCD1O75127 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms