Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU7-59P-201ENST00000459101 61 ntBASIC3.18□□□□□ -1.9
PRKNO60260 snoU13.22-201ENST00000459428 104 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC093663.1-201ENST00000497190 394 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC135721.1-201ENST00000497954 479 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC074250.1-201ENST00000511117 192 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.18□□□□□ -1.9
PRKNO60260 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.18□□□□□ -1.9
PRKNO60260 OR5D17P-201ENST00000531492 978 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.18□□□□□ -1.9
PRKNO60260 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.18□□□□□ -1.9
PRKNO60260 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.18□□□□□ -1.9
PRKNO60260 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.18□□□□□ -1.9
PRKNO60260 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.18□□□□□ -1.9
PRKNO60260 AL133153.1-201ENST00000557756 303 ntBASIC3.18□□□□□ -1.9
PRKNO60260 ZNF192P1-203ENST00000565888 810 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 MIR3944-201ENST00000581277 108 ntBASIC3.18□□□□□ -1.9
PRKNO60260 AC090616.5-202ENST00000582111 297 ntBASIC3.18□□□□□ -1.9
PRKNO60260 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.18□□□□□ -1.9
PRKNO60260 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PRKNO60260 AC090517.2-201ENST00000614966 680 ntBASIC3.18□□□□□ -1.9
PRKNO60260 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.18□□□□□ -1.9
PRKNO60260 AL136313.1-201ENST00000624804 202 ntBASIC3.18□□□□□ -1.9
PRKNO60260 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.18□□□□□ -1.9
PRKNO60260 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PRKNO60260 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.18□□□□□ -1.9
PRKNO60260 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
PRKNO60260 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.18□□□□□ -1.9
PRKNO60260 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRKNO60260 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.17□□□□□ -1.9
PRKNO60260 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
PRKNO60260 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.17□□□□□ -1.9
PRKNO60260 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PRKNO60260 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.17□□□□□ -1.9
PRKNO60260 RNA5SP387-201ENST00000364226 106 ntBASIC3.17□□□□□ -1.9
PRKNO60260 RNU6-629P-201ENST00000384061 103 ntBASIC3.17□□□□□ -1.9
PRKNO60260 RNU6-1103P-201ENST00000384150 107 ntBASIC3.17□□□□□ -1.9
PRKNO60260 RNU6-328P-201ENST00000390887 106 ntBASIC3.17□□□□□ -1.9
PRKNO60260 SNORD115-47-201ENST00000391226 86 ntBASIC3.17□□□□□ -1.9
PRKNO60260 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 AL078595.1-201ENST00000404458 226 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AL590002.1-201ENST00000406554 418 ntBASIC3.17□□□□□ -1.9
PRKNO60260 Z99755.1-201ENST00000414048 380 ntBASIC3.17□□□□□ -1.9
PRKNO60260 RPS7P15-201ENST00000415804 584 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC244098.2-201ENST00000422068 99 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 DPPA2P1-201ENST00000428060 556 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 NPM1P49-201ENST00000448027 714 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 MTCO2P29-201ENST00000465212 189 ntBASIC3.17□□□□□ -1.9
PRKNO60260 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PRKNO60260 RPL7P23-201ENST00000493874 747 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 AC026801.2-201ENST00000515352 425 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
PRKNO60260 DEFB108D-201ENST00000527787 222 ntBASIC3.17□□□□□ -1.9
PRKNO60260 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.17□□□□□ -1.9
PRKNO60260 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.17□□□□□ -1.9
PRKNO60260 AC125611.2-201ENST00000551907 647 ntBASIC3.17□□□□□ -1.9
PRKNO60260 SUB1P2-201ENST00000556401 297 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.17□□□□□ -1.9
PRKNO60260 AC008277.2-201ENST00000605196 797 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AC103710.3-201ENST00000608157 948 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AL359880.1-201ENST00000621879 266 ntBASIC3.17□□□□□ -1.9
PRKNO60260 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.17□□□□□ -1.9
PRKNO60260 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 AC093536.2-201ENST00000565257 1406 ntBASIC3.17□□□□□ -1.9
PRKNO60260 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRKNO60260 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.16□□□□□ -1.9
PRKNO60260 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
PRKNO60260 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRKNO60260 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRKNO60260 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRKNO60260 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRKNO60260 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.16□□□□□ -1.9
PRKNO60260 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKNO60260 AC032011.1-201ENST00000611703 1549 ntBASIC3.16□□□□□ -1.9
PRKNO60260 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKNO60260 RNU6-169P-201ENST00000365336 107 ntBASIC3.16□□□□□ -1.9
PRKNO60260 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKNO60260 RNU6-456P-201ENST00000384493 107 ntBASIC3.16□□□□□ -1.9
PRKNO60260 MIR34B-201ENST00000385076 84 ntBASIC3.16□□□□□ -1.9
PRKNO60260 RNU6-780P-201ENST00000391030 104 ntBASIC3.16□□□□□ -1.9
PRKNO60260 RNU2-62P-201ENST00000410868 191 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.16□□□□□ -1.9
PRKNO60260 AC005300.1-201ENST00000428401 373 ntBASIC3.16□□□□□ -1.9
PRKNO60260 RPL35AP22-201ENST00000436855 335 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AC093156.1-201ENST00000440382 670 ntBASIC3.16□□□□□ -1.9
PRKNO60260 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms