Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL136313.1-201ENST00000624804 202 ntBASIC3.23□□□□□ -1.89
TO15178 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.23□□□□□ -1.89
TO15178 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
TO15178 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TO15178 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 AC007496.3-201ENST00000624987 3443 ntBASIC3.23□□□□□ -1.89
TO15178 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TO15178 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.23□□□□□ -1.89
TO15178 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 OR1S2-201ENST00000302592 978 ntBASIC3.22□□□□□ -1.89
TO15178 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
TO15178 Y_RNA.436-201ENST00000384097 102 ntBASIC3.22□□□□□ -1.89
TO15178 MIR449B-201ENST00000384995 97 ntBASIC3.22□□□□□ -1.89
TO15178 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
TO15178 MIR493-201ENST00000385254 89 ntBASIC3.22□□□□□ -1.89
TO15178 U3.42-201ENST00000408746 214 ntBASIC3.22□□□□□ -1.89
TO15178 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.22□□□□□ -1.89
TO15178 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.22□□□□□ -1.89
TO15178 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
TO15178 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.22□□□□□ -1.89
TO15178 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.22□□□□□ -1.89
TO15178 AC073063.1-201ENST00000434352 607 ntBASIC3.22□□□□□ -1.89
TO15178 AC073614.1-201ENST00000438690 650 ntBASIC3.22□□□□□ -1.89
TO15178 AL357552.1-201ENST00000445254 415 ntBASIC3.22□□□□□ -1.89
TO15178 MTCO2P7-201ENST00000446518 666 ntBASIC3.22□□□□□ -1.89
TO15178 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.22□□□□□ -1.89
TO15178 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
TO15178 AL049714.1-201ENST00000466686 347 ntBASIC3.22□□□□□ -1.89
TO15178 RPL7P5-201ENST00000471472 736 ntBASIC3.22□□□□□ -1.89
TO15178 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.22□□□□□ -1.89
TO15178 MTCO3P7-201ENST00000510008 774 ntBASIC3.22□□□□□ -1.89
TO15178 AC114797.1-201ENST00000514003 728 ntBASIC3.22□□□□□ -1.89
TO15178 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.22□□□□□ -1.89
TO15178 RNU6-390P-201ENST00000516259 103 ntBASIC3.22□□□□□ -1.89
TO15178 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 AC011979.2-201ENST00000527568 352 ntBASIC3.22□□□□□ -1.89
TO15178 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.22□□□□□ -1.89
TO15178 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.22□□□□□ -1.89
TO15178 AL355836.1-201ENST00000555951 870 ntBASIC3.22□□□□□ -1.89
TO15178 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.22□□□□□ -1.89
TO15178 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
TO15178 ZNF415P1-201ENST00000582279 1166 ntBASIC3.22□□□□□ -1.89
TO15178 NRBF2P1-201ENST00000587407 859 ntBASIC3.22□□□□□ -1.89
TO15178 AC100793.4-201ENST00000613683 429 ntBASIC3.22□□□□□ -1.89
TO15178 AC010133.1-201ENST00000615809 842 ntBASIC3.22□□□□□ -1.89
TO15178 U4.6-201ENST00000621618 127 ntBASIC3.22□□□□□ -1.89
TO15178 AC110994.2-201ENST00000635481 492 ntBASIC3.22□□□□□ -1.89
TO15178 AC008568.2-201ENST00000623862 2313 ntBASIC3.22□□□□□ -1.89
TO15178 AC073073.2-201ENST00000609827 2578 ntBASIC3.22□□□□□ -1.89
TO15178 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
TO15178 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TO15178 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TO15178 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
TO15178 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.89
TO15178 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TO15178 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TO15178 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
TO15178 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TO15178 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TO15178 RNU6-623P-201ENST00000363143 105 ntBASIC3.21□□□□□ -1.9
TO15178 U8.3-201ENST00000363321 132 ntBASIC3.21□□□□□ -1.9
TO15178 RNU6-1284P-201ENST00000363701 100 ntBASIC3.21□□□□□ -1.9
TO15178 Y_RNA.194-201ENST00000363985 102 ntBASIC3.21□□□□□ -1.9
TO15178 Y_RNA.318-201ENST00000365131 97 ntBASIC3.21□□□□□ -1.9
TO15178 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.21□□□□□ -1.9
TO15178 SNORA1.3-201ENST00000384676 136 ntBASIC3.21□□□□□ -1.9
TO15178 RPL23AP32-201ENST00000395315 459 ntBASIC3.21□□□□□ -1.9
TO15178 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
TO15178 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.21□□□□□ -1.9
TO15178 RPS29P4-201ENST00000414733 161 ntBASIC3.21□□□□□ -1.9
TO15178 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.21□□□□□ -1.9
TO15178 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.21□□□□□ -1.9
TO15178 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 AC009961.2-201ENST00000435771 251 ntBASIC3.21□□□□□ -1.9
TO15178 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.21□□□□□ -1.9
TO15178 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.21□□□□□ -1.9
TO15178 AC016696.1-201ENST00000446949 318 ntBASIC3.21□□□□□ -1.9
TO15178 AL590664.1-201ENST00000448065 339 ntBASIC3.21□□□□□ -1.9
TO15178 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 GAPDHP17-201ENST00000449858 1001 ntBASIC3.21□□□□□ -1.9
TO15178 RPS20P20-201ENST00000460498 340 ntBASIC3.21□□□□□ -1.9
TO15178 AC010631.1-201ENST00000474150 156 ntBASIC3.21□□□□□ -1.9
TO15178 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.21□□□□□ -1.9
TO15178 AL049874.1-201ENST00000489560 388 ntBASIC3.21□□□□□ -1.9
TO15178 SNORA18.6-201ENST00000516792 115 ntBASIC3.21□□□□□ -1.9
TO15178 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
TO15178 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.21□□□□□ -1.9
TO15178 AC093012.1-202ENST00000549403 582 ntBASIC3.21□□□□□ -1.9
TO15178 AC037471.2-201ENST00000564941 598 ntBASIC3.21□□□□□ -1.9
TO15178 MIR4293-201ENST00000584305 78 ntBASIC3.21□□□□□ -1.9
TO15178 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.21□□□□□ -1.9
TO15178 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms