Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC236972.1-201ENST00000433225 199 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 RPL22P17-201ENST00000438729 315 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.54□□□□□ -1.84
ATP2A1O14983 AL592447.1-201ENST00000447592 540 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 MTCO2P18-201ENST00000457151 658 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 RNU6-956P-201ENST00000458868 103 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.54□□□□□ -1.84
ATP2A1O14983 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 KLHL2P1-201ENST00000508691 521 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.54□□□□□ -1.84
ATP2A1O14983 RPL12P22-201ENST00000519073 490 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AC022878.1-201ENST00000530684 149 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.54□□□□□ -1.84
ATP2A1O14983 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.54□□□□□ -1.84
ATP2A1O14983 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.54□□□□□ -1.84
ATP2A1O14983 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.54□□□□□ -1.84
ATP2A1O14983 RSL24D1P11-201ENST00000591045 491 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AC112191.3-201ENST00000604371 277 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 RN7SKP299-201ENST00000606679 301 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.54□□□□□ -1.84
ATP2A1O14983 AC092140.2-201ENST00000618027 521 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AC012150.2-201ENST00000621300 544 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 AC009878.1-201ENST00000621819 340 ntBASIC3.54□□□□□ -1.84
ATP2A1O14983 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATP2A1O14983 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATP2A1O14983 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ATP2A1O14983 AC000403.1-201ENST00000613696 3585 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2A1O14983 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2A1O14983 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2A1O14983 TAB3P1-202ENST00000452645 1634 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 RNU6-805P-201ENST00000365643 106 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2A1O14983 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ATP2A1O14983 RNU6-637P-201ENST00000384050 107 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ATP2A1O14983 Y_RNA.598-201ENST00000410480 95 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 RPL21P32-201ENST00000419877 477 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AL139132.1-201ENST00000431587 344 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 OR4K11P-201ENST00000431829 904 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AL049734.2-201ENST00000441066 616 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AP000936.2-201ENST00000447151 681 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 snoU13.4-201ENST00000458916 104 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 RN7SL330P-201ENST00000469709 307 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 RPS27AP1-201ENST00000475545 471 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC012181.1-201ENST00000479895 423 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC055855.1-201ENST00000489563 579 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 MTND4P2-201ENST00000507767 1203 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AC026801.2-201ENST00000515352 425 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC009812.2-201ENST00000517657 457 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.53□□□□□ -1.84
ATP2A1O14983 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AP000907.2-201ENST00000530827 353 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ATP2A1O14983 AC135279.1-201ENST00000543493 504 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC024909.2-201ENST00000553035 286 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 MTCYBP33-201ENST00000575007 1130 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AL022099.1-201ENST00000604551 712 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC064872.1-201ENST00000604823 1072 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC087752.4-201ENST00000605911 462 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AC108479.2-201ENST00000617314 601 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 MIR6852-201ENST00000621699 66 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AC091903.1-201ENST00000624322 454 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 AL603839.4-201ENST00000624658 1005 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 AC090582.1-201ENST00000636321 199 ntBASIC3.53□□□□□ -1.84
ATP2A1O14983 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
ATP2A1O14983 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
ATP2A1O14983 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.52□□□□□ -1.85
ATP2A1O14983 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.52□□□□□ -1.85
ATP2A1O14983 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.52□□□□□ -1.85
ATP2A1O14983 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATP2A1O14983 RNU6-7-201ENST00000364784 107 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 RNU6-8-201ENST00000365467 107 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
ATP2A1O14983 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.52□□□□□ -1.85
ATP2A1O14983 RPS3AP24-201ENST00000407896 734 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 HMGN1P14-201ENST00000412459 517 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.52□□□□□ -1.85
ATP2A1O14983 BTF3L4P1-201ENST00000413813 468 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
ATP2A1O14983 MTCO1P39-201ENST00000426148 480 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.52□□□□□ -1.85
ATP2A1O14983 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.52□□□□□ -1.85
ATP2A1O14983 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.52□□□□□ -1.85
ATP2A1O14983 AC004866.2-201ENST00000438285 481 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 RAC1P7-201ENST00000445367 377 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ATP2A1O14983 TPT1P14-201ENST00000448018 505 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 SSXP1-201ENST00000453640 473 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 MTCO2P32-201ENST00000514865 403 ntBASIC3.52□□□□□ -1.85
ATP2A1O14983 SNORA64.4-201ENST00000516632 81 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms