Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL590704.1-201ENST00000402856 794 ntBASIC5.05□□□□□ -1.6
SOX1O00570 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX1O00570 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX1O00570 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX1O00570 AC133473.1-201ENST00000455173 299 ntBASIC5.05□□□□□ -1.6
SOX1O00570 RNU7-187P-201ENST00000458985 68 ntBASIC5.05□□□□□ -1.6
SOX1O00570 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX1O00570 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX1O00570 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 AC093852.1-201ENST00000503587 266 ntBASIC5.05□□□□□ -1.6
SOX1O00570 IGHV3-76-201ENST00000522465 295 ntBASIC5.05□□□□□ -1.6
SOX1O00570 OR5D17P-201ENST00000531492 978 ntBASIC5.05□□□□□ -1.6
SOX1O00570 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 AC112484.5-201ENST00000624189 228 ntBASIC5.05□□□□□ -1.6
SOX1O00570 MIR4272-201ENST00000635924 64 ntBASIC5.05□□□□□ -1.6
SOX1O00570 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 AC093849.1-201ENST00000563631 2209 ntBASIC5.05□□□□□ -1.6
SOX1O00570 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX1O00570 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX1O00570 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SOX1O00570 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX1O00570 AC109446.4-201ENST00000623235 2755 ntBASIC5.04□□□□□ -1.6
SOX1O00570 A2MP1-204ENST00000566278 4130 ntBASIC5.04□□□□□ -1.6
SOX1O00570 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SOX1O00570 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 ZNF137P-201ENST00000456718 1920 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC021146.4-201ENST00000309229 279 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC138393.1-203ENST00000327086 343 ntBASIC5.04□□□□□ -1.6
SOX1O00570 RNA5SP453-201ENST00000362503 119 ntBASIC5.04□□□□□ -1.6
SOX1O00570 Y_RNA.151-201ENST00000363566 112 ntBASIC5.04□□□□□ -1.6
SOX1O00570 RNA5SP513-201ENST00000364648 118 ntBASIC5.04□□□□□ -1.6
SOX1O00570 SNORA23-201ENST00000365128 182 ntBASIC5.04□□□□□ -1.6
SOX1O00570 Y_RNA.577-201ENST00000384794 101 ntBASIC5.04□□□□□ -1.6
SOX1O00570 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SOX1O00570 AC110754.1-201ENST00000399740 601 ntBASIC5.04□□□□□ -1.6
SOX1O00570 EIF4A1P3-201ENST00000411521 244 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC092447.6-201ENST00000414578 210 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC092809.3-201ENST00000415453 231 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AL356095.1-201ENST00000417217 199 ntBASIC5.04□□□□□ -1.6
SOX1O00570 SYF2P2-201ENST00000417620 583 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AL160275.3-201ENST00000423876 471 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC138761.5-201ENST00000433967 325 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AL450023.3-201ENST00000440592 271 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC083899.1-201ENST00000454465 3819 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC110768.1-201ENST00000509222 400 ntBASIC5.04□□□□□ -1.6
SOX1O00570 Y_RNA.680-201ENST00000516441 93 ntBASIC5.04□□□□□ -1.6
SOX1O00570 RN7SKP82-201ENST00000516786 223 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC069113.1-201ENST00000517763 267 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.04□□□□□ -1.6
SOX1O00570 AC040926.1-201ENST00000530195 238 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC109446.1-201ENST00000566172 220 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC067852.3-201ENST00000589177 561 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.04□□□□□ -1.6
SOX1O00570 AC002044.1-201ENST00000606707 158 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC099669.2-201ENST00000616549 437 ntBASIC5.04□□□□□ -1.6
SOX1O00570 AC012314.7-201ENST00000619693 93 ntBASIC5.04□□□□□ -1.6
SOX1O00570 U6.104-201ENST00000637979 90 ntBASIC5.04□□□□□ -1.6
SOX1O00570 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SOX1O00570 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.04□□□□□ -1.6
SOX1O00570 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX1O00570 BTBD10P1-201ENST00000549824 1352 ntBASIC5.04□□□□□ -1.6
SOX1O00570 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX1O00570 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX1O00570 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 AC092681.1-201ENST00000297369 291 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RNA5SP119-201ENST00000362715 117 ntBASIC5.03□□□□□ -1.6
SOX1O00570 Y_RNA.222-201ENST00000364264 102 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RNU6-596P-201ENST00000365395 98 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RNU6-1329P-201ENST00000365664 107 ntBASIC5.03□□□□□ -1.6
SOX1O00570 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX1O00570 RNU6-1062P-201ENST00000383908 107 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RNU11-201ENST00000387069 134 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RN7SKP267-201ENST00000410381 285 ntBASIC5.03□□□□□ -1.6
SOX1O00570 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX1O00570 AC108032.1-201ENST00000416706 207 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX1O00570 AL391219.1-201ENST00000422570 483 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AL158071.1-201ENST00000430315 461 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AC011998.1-201ENST00000433403 117 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AL162151.2-201ENST00000448875 158 ntBASIC5.03□□□□□ -1.6
SOX1O00570 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.03□□□□□ -1.6
SOX1O00570 PCMTD1P1-201ENST00000455560 355 ntBASIC5.03□□□□□ -1.6
SOX1O00570 RNU6-953P-201ENST00000459154 107 ntBASIC5.03□□□□□ -1.6
SOX1O00570 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.03□□□□□ -1.6
SOX1O00570 AC022447.4-201ENST00000504053 364 ntBASIC5.03□□□□□ -1.6
SOX1O00570 AC105758.1-201ENST00000506038 399 ntBASIC5.03□□□□□ -1.6
SOX1O00570 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SOX1O00570 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms