Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL831737.1-201ENST00000441288 271 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.11□□□□□ -1.91
RTCAO00442 MTND3P7-201ENST00000474435 343 ntBASIC3.11□□□□□ -1.91
RTCAO00442 RPL21P129-201ENST00000491732 478 ntBASIC3.11□□□□□ -1.91
RTCAO00442 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.11□□□□□ -1.91
RTCAO00442 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 RNU6-1003P-201ENST00000517099 105 ntBASIC3.11□□□□□ -1.91
RTCAO00442 RNU6-840P-201ENST00000517275 65 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.11□□□□□ -1.91
RTCAO00442 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.11□□□□□ -1.91
RTCAO00442 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.11□□□□□ -1.91
RTCAO00442 AC013828.2-201ENST00000532487 235 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.11□□□□□ -1.91
RTCAO00442 RPL21P12-201ENST00000559810 515 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AC068135.2-201ENST00000569293 1028 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AC006504.3-201ENST00000586818 523 ntBASIC3.11□□□□□ -1.91
RTCAO00442 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.11□□□□□ -1.91
RTCAO00442 BNIP3P23-201ENST00000599655 511 ntBASIC3.11□□□□□ -1.91
RTCAO00442 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.11□□□□□ -1.91
RTCAO00442 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.11□□□□□ -1.91
RTCAO00442 UCA1.1-201ENST00000620952 75 ntBASIC3.11□□□□□ -1.91
RTCAO00442 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RTCAO00442 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTCAO00442 MTND4P16-201ENST00000466108 1367 ntBASIC3.11□□□□□ -1.91
RTCAO00442 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.11□□□□□ -1.91
RTCAO00442 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTCAO00442 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RNA5SP171-201ENST00000391071 115 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RPL21P75-201ENST00000396599 483 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RPL21P28-201ENST00000401418 483 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AL592114.1-201ENST00000403842 483 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RNA5SP44-201ENST00000410446 133 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RNA5SP31-201ENST00000411144 127 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AL389915.1-201ENST00000422463 466 ntBASIC3.1□□□□□ -1.91
RTCAO00442 MED14P1-201ENST00000430517 648 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AL365184.2-201ENST00000431139 435 ntBASIC3.1□□□□□ -1.91
RTCAO00442 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.1□□□□□ -1.91
RTCAO00442 RPL37P21-201ENST00000435890 276 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.1□□□□□ -1.91
RTCAO00442 AC112653.1-201ENST00000443851 386 ntBASIC3.1□□□□□ -1.91
RTCAO00442 FAM103A2P-201ENST00000444122 354 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTCAO00442 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.1□□□□□ -1.91
RTCAO00442 RPL21P39-201ENST00000463605 483 ntBASIC3.1□□□□□ -1.91
RTCAO00442 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.1□□□□□ -1.91
RTCAO00442 RPL31P41-201ENST00000477967 372 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RPL21P93-201ENST00000480465 489 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC233702.1-201ENST00000482905 502 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC087190.1-201ENST00000484462 480 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC093591.1-201ENST00000491435 481 ntBASIC3.1□□□□□ -1.91
RTCAO00442 RPL21P16-201ENST00000495531 483 ntBASIC3.1□□□□□ -1.91
RTCAO00442 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.1□□□□□ -1.91
RTCAO00442 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.1□□□□□ -1.91
RTCAO00442 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.1□□□□□ -1.91
RTCAO00442 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTCAO00442 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.1□□□□□ -1.91
RTCAO00442 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.1□□□□□ -1.91
RTCAO00442 UBE2L4-201ENST00000587688 464 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC097065.2-201ENST00000608159 533 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC131902.3-201ENST00000611767 581 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.1□□□□□ -1.91
RTCAO00442 AC004696.1-201ENST00000614345 607 ntBASIC3.1□□□□□ -1.91
RTCAO00442 MIR7975-201ENST00000619350 68 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC244100.1-202ENST00000621554 382 ntBASIC3.1□□□□□ -1.91
RTCAO00442 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
RTCAO00442 AL158801.5-201ENST00000623123 465 ntBASIC3.1□□□□□ -1.91
RTCAO00442 AC092192.1-201ENST00000633154 1018 ntBASIC3.1□□□□□ -1.91
RTCAO00442 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.1□□□□□ -1.91
RTCAO00442 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTCAO00442 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RTCAO00442 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.09□□□□□ -1.91
RTCAO00442 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
RTCAO00442 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RTCAO00442 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
RTCAO00442 Y_RNA.560-201ENST00000384689 102 ntBASIC3.09□□□□□ -1.91
RTCAO00442 SNORD115.1-201ENST00000391109 76 ntBASIC3.09□□□□□ -1.91
RTCAO00442 SNORA11-201ENST00000408789 128 ntBASIC3.09□□□□□ -1.91
RTCAO00442 RNU6-516P-201ENST00000411381 104 ntBASIC3.09□□□□□ -1.91
RTCAO00442 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
RTCAO00442 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
RTCAO00442 UBE2V1P13-201ENST00000436983 439 ntBASIC3.09□□□□□ -1.91
RTCAO00442 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.09□□□□□ -1.91
RTCAO00442 MTND1P30-201ENST00000441241 901 ntBASIC3.09□□□□□ -1.91
RTCAO00442 RPL7P36-201ENST00000444633 681 ntBASIC3.09□□□□□ -1.91
RTCAO00442 RPS15AP27-201ENST00000449183 343 ntBASIC3.09□□□□□ -1.91
RTCAO00442 AC115115.1-201ENST00000449927 248 ntBASIC3.09□□□□□ -1.91
RTCAO00442 PRSS3P4-201ENST00000453323 162 ntBASIC3.09□□□□□ -1.91
RTCAO00442 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.09□□□□□ -1.91
RTCAO00442 AL590639.1-201ENST00000456484 337 ntBASIC3.09□□□□□ -1.91
RTCAO00442 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.09□□□□□ -1.91
RTCAO00442 AC138853.1-201ENST00000503549 823 ntBASIC3.09□□□□□ -1.91
RTCAO00442 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.09□□□□□ -1.91
RTCAO00442 AC114967.1-201ENST00000504890 259 ntBASIC3.09□□□□□ -1.91
RTCAO00442 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.09□□□□□ -1.91
RTCAO00442 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.09□□□□□ -1.91
RTCAO00442 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.09□□□□□ -1.91
RTCAO00442 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms