Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MIR218-2-201ENST00000385006 110 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 RN7SKP202-201ENST00000410439 330 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AL663109.1-201ENST00000411498 844 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 BX295541.1-201ENST00000417774 250 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC018644.1-201ENST00000429934 551 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC119618.1-201ENST00000434191 222 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC073614.1-201ENST00000438690 650 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC122718.1-201ENST00000439448 744 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 TPTE2P5-203ENST00000458118 728 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC091435.1-201ENST00000505442 584 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AL359273.1-201ENST00000510918 627 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 RNU6-390P-201ENST00000516259 103 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 RNU1-45P-201ENST00000517191 141 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 FAM60DP-201ENST00000524174 632 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AL391156.1-201ENST00000554965 554 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC055876.1-202ENST00000567053 138 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AGGF1P4-201ENST00000568249 801 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 MIR3921-201ENST00000577308 85 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 MIR4276-201ENST00000584832 70 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AL162713.1-201ENST00000604480 262 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC103710.2-201ENST00000609912 942 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC010133.1-201ENST00000615809 842 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AC012442.3-202ENST00000636742 206 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 U6.98-201ENST00000637157 84 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 OR4G2P-202ENST00000641004 1759 ntBASIC3.5□□□□□ -1.85
LRRC53A6NM62 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.5□□□□□ -1.85
LRRC53A6NM62 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 RNU6-623P-201ENST00000363143 105 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 MIR514A1-201ENST00000385133 98 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 MIR493-201ENST00000385254 89 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC127391.1-201ENST00000411737 98 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 C1DP2-201ENST00000418167 426 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 USP9YP36-201ENST00000424581 829 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 RPS24P1-201ENST00000438550 371 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC093156.1-201ENST00000440382 670 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 USP9YP15-201ENST00000442391 422 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC016696.1-201ENST00000446949 318 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL133547.1-201ENST00000448546 220 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC140076.1-201ENST00000449897 361 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC026403.1-201ENST00000518938 295 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC007458.1-201ENST00000542812 373 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC087683.1-201ENST00000591187 441 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL139286.2-201ENST00000606838 396 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL589743.7-201ENST00000612637 233 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 AL133173.2-201ENST00000614270 90 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 SNHG22-203ENST00000617833 660 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 AC007256.1-201ENST00000392253 2765 ntBASIC3.49□□□□□ -1.85
LRRC53A6NM62 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
LRRC53A6NM62 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
LRRC53A6NM62 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC53A6NM62 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC53A6NM62 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LRRC53A6NM62 U3.6-201ENST00000363622 211 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 SNORD116-4-201ENST00000384733 96 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AL359634.1-202ENST00000404721 284 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 RNU2-8P-201ENST00000410727 190 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 RPL32P35-201ENST00000415214 394 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC007390.1-201ENST00000415722 356 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.48□□□□□ -1.85
LRRC53A6NM62 MTATP6P30-201ENST00000443540 664 ntBASIC3.48□□□□□ -1.85
LRRC53A6NM62 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms