Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AP005403.1-201ENST00000579720 229 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RCCD1A6NED2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC008749.1-201ENST00000597650 306 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 MIR6861-201ENST00000618657 64 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 MIR1910-201ENST00000636955 80 ntBASIC5.84□□□□□ -1.47
RCCD1A6NED2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.84□□□□□ -1.47
RCCD1A6NED2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RCCD1A6NED2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RCCD1A6NED2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
RCCD1A6NED2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RCCD1A6NED2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RCCD1A6NED2 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RCCD1A6NED2 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RCCD1A6NED2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RCCD1A6NED2 RNU6-336P-201ENST00000364891 107 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 SNORD20-201ENST00000384550 80 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 RNU1-139P-201ENST00000391307 165 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 SNORA11.3-201ENST00000408471 128 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 AP000281.1-201ENST00000444036 316 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 FABP5P15-201ENST00000453566 214 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 RPL23AP24-201ENST00000458203 385 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC005532.2-201ENST00000467154 373 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC117440.1-201ENST00000474107 571 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 RPL23AP75-201ENST00000491601 451 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 LSM3P4-201ENST00000502948 309 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC040958.1-201ENST00000561102 201 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 MIR4310-201ENST00000582950 57 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 SNORA11.6-201ENST00000619030 128 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 IGHVIII-44-202ENST00000636235 289 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 U4.7-201ENST00000638126 106 ntBASIC5.83□□□□□ -1.48
RCCD1A6NED2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RCCD1A6NED2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.83□□□□□ -1.48
RCCD1A6NED2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 SNORD115-32-201ENST00000364079 82 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 RNA5SP131-201ENST00000365452 119 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 OR1L6-202ENST00000373684 1044 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 RNU6-968P-201ENST00000384076 107 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 Y_RNA.446-201ENST00000384178 104 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 SNORA51.8-201ENST00000384234 132 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 SNORA16A-201ENST00000384342 137 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 Y_RNA.586-201ENST00000391146 98 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 RPL19P16-201ENST00000433839 588 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 RPL12P11-201ENST00000439970 501 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC008267.6-201ENST00000441664 139 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 UQCRBP2-201ENST00000447827 297 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 AL049874.1-201ENST00000489560 388 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC025458.1-201ENST00000506046 166 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC021006.3-201ENST00000530771 192 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 RPL21P9-201ENST00000556149 474 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC244107.2-201ENST00000611773 76 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 RN7SL544P-201ENST00000617232 284 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 AC024884.1-201ENST00000620583 399 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 RN7SL763P-201ENST00000620922 284 ntBASIC5.82□□□□□ -1.48
RCCD1A6NED2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RCCD1A6NED2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
RCCD1A6NED2 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RCCD1A6NED2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
RCCD1A6NED2 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RCCD1A6NED2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RCCD1A6NED2 AC005522.1-201ENST00000395416 346 ntBASIC5.81□□□□□ -1.48
RCCD1A6NED2 COX5BP7-201ENST00000414780 274 ntBASIC5.81□□□□□ -1.48
RCCD1A6NED2 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms