Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL450472.3-201ENST00000615578 367 ntBASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 uc_338.11-201ENST00000619132 160 ntBASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PTPDC1A2A3K4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 GABPAP-201ENST00000419271 1356 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 ASNSP3-201ENST00000451989 1306 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 MIR30B-201ENST00000384850 88 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 SNORD37.1-201ENST00000390968 65 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 RNU6-332P-201ENST00000391193 108 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 RPL23AP48-201ENST00000406913 488 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 RNU2-43P-201ENST00000410306 190 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 RNU2-29P-201ENST00000410423 189 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 RNU6-193P-201ENST00000410977 107 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC004866.2-201ENST00000438285 481 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AP005435.4-201ENST00000529514 284 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC125611.2-201ENST00000551907 647 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AP001486.3-201ENST00000615334 372 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC103858.2-201ENST00000621471 543 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AL359697.1-201ENST00000624879 587 ntBASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PTPDC1A2A3K4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL139276.1-201ENST00000311910 1001 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 Y_RNA.142-201ENST00000363491 102 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RNU6-188P-201ENST00000364207 107 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 MIR670-201ENST00000390142 98 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RNU6-903P-201ENST00000391270 109 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 PTMAP2-201ENST00000397627 327 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL359634.1-202ENST00000404721 284 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL162578.1-201ENST00000406202 378 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 SSXP9-201ENST00000417503 292 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 ATP5HP2-201ENST00000433885 485 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RN7SL432P-201ENST00000484057 298 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RN7SL323P-201ENST00000494712 295 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AC092436.1-201ENST00000506450 503 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AC004062.1-201ENST00000509926 645 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RNU4-29P-201ENST00000515943 174 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RNA5SP503-201ENST00000517047 117 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 SUMO2P20-201ENST00000520803 283 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 BNIP3P6-201ENST00000549284 499 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL121603.1-201ENST00000553815 142 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.6-201ENST00000603753 252 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.11-201ENST00000604059 253 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AC008162.1-201ENST00000604718 254 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.1-201ENST00000604752 252 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.5-201ENST00000605253 252 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.12-201ENST00000605291 253 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.8-201ENST00000605353 252 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 AL670379.7-201ENST00000605823 252 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 FP236240.3-201ENST00000623061 327 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 U6.114-201ENST00000636407 96 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 MIR4275-201ENST00000636486 87 ntBASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PTPDC1A2A3K4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 AC092326.2-201ENST00000624772 1561 ntBASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 RNU6-552P-201ENST00000362869 119 ntBASIC4.54□□□□□ -1.68
PTPDC1A2A3K4 Y_RNA.166-201ENST00000363730 102 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms