Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL137003.2-201ENST00000606924 2538 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC104458.1-201ENST00000608243 463 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AP001596.2-201ENST00000608410 312 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC068724.3-201ENST00000625906 87 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC138649.5-201ENST00000637456 137 ntBASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TCRBV7S3A2A0A539 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-173P-201ENST00000364215 104 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 Y_RNA.367-201ENST00000365544 101 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-483P-201ENST00000384088 108 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 Y_RNA.453-201ENST00000384223 109 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 MTCO1P20-201ENST00000425366 358 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RPL21P112-201ENST00000434403 463 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 HMGB3P12-201ENST00000438745 556 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 DDX3P2-201ENST00000446138 111 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RPS4XP2-201ENST00000458402 793 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC103987.1-201ENST00000473394 348 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 VN1R104P-201ENST00000505115 1009 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 MLLT10P2-201ENST00000506434 249 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-1092P-201ENST00000516955 87 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SKP60-201ENST00000516985 239 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 ERHP1-201ENST00000523006 310 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC134698.4-201ENST00000523451 826 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC093012.1-202ENST00000549403 582 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RPS3AP4-201ENST00000555161 764 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AL355810.1-201ENST00000614629 552 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 MIR6810-201ENST00000622701 70 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC110801.1-201ENST00000623590 212 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 AC058791.1-201ENST00000608412 3198 ntBASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
TCRBV7S3A2A0A539 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 SDAD1P2-201ENST00000441308 2028 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-1090P-201ENST00000364065 94 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SKP280-201ENST00000364196 304 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU4-48P-201ENST00000365559 182 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 SNORA36C-201ENST00000384289 132 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 Y_RNA.573-201ENST00000384763 105 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-1158P-201ENST00000391167 107 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SKP285-201ENST00000410137 318 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RN7SKP177-201ENST00000410567 355 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU2-39P-201ENST00000410604 198 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-55P-201ENST00000411092 107 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RNU6-954P-201ENST00000411355 107 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 MRPL50P2-201ENST00000416821 482 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 USP9YP27-201ENST00000418455 438 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 RPL7P2-201ENST00000427639 268 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 ELOCP14-201ENST00000428070 331 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 BX679664.1-201ENST00000434429 253 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 MTATP6P16-201ENST00000434543 526 ntBASIC3.55□□□□□ -1.84
TCRBV7S3A2A0A539 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms