Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 RNU6-444P-201ENST00000383988 108 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 RNU6-1151P-201ENST00000384684 107 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AL450338.1-201ENST00000407987 512 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 RPS20P15-201ENST00000412792 311 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 CYCSP48-201ENST00000417124 323 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 RPL31P63-201ENST00000422565 375 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 EIF4EP4-201ENST00000424916 578 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AL035410.1-201ENST00000427409 427 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC012497.1-201ENST00000429392 575 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC124916.1-201ENST00000444020 547 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC068135.1-201ENST00000446164 246 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 snoU109.4-201ENST00000458953 143 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 HMGN1P8-201ENST00000463578 288 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 RPL23AP42-201ENST00000471152 471 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC015724.1-201ENST00000478577 156 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC147055.4-201ENST00000504399 745 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC006499.2-201ENST00000513470 337 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 EEF1B2P4-201ENST00000551398 348 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC022662.1-201ENST00000580252 331 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 MIR4513-201ENST00000581077 86 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC124283.4-201ENST00000581815 456 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 SUMO2P14-201ENST00000604488 293 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC079791.1-201ENST00000605356 973 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 MIR502-201ENST00000606349 86 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC093838.1-201ENST00000613014 469 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 AC068722.2-201ENST00000618734 544 ntBASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.22□□□□□ -2.21
TRAV12-3A0A0B4J271 RNU6-234P-201ENST00000365229 104 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 RNA5SP270-201ENST00000411361 118 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 VN1R51P-201ENST00000411675 945 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC099548.1-201ENST00000421443 426 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 PGBD4P6-201ENST00000421501 610 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 XKRYP1-201ENST00000423438 492 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 XKRYP2-201ENST00000432915 492 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 IFNA20P-201ENST00000436840 528 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 HMGB3P12-201ENST00000438745 556 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 UBE2V1P5-201ENST00000440070 405 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC016691.1-201ENST00000441321 413 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 ATG12P2-201ENST00000456830 416 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AL049714.1-201ENST00000466686 347 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC104164.3-201ENST00000467363 1258 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC105252.1-201ENST00000503089 286 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC011352.3-201ENST00000505162 593 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 SUMO2P6-201ENST00000505273 288 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC093770.1-201ENST00000511559 571 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 SNORA31.13-201ENST00000516624 135 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC084851.1-201ENST00000529105 249 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 OR4P1P-201ENST00000530808 1136 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AK6P1-201ENST00000540219 478 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 NRBF2P1-201ENST00000587407 859 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC004908.2-201ENST00000609090 574 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AC116618.1-201ENST00000634617 774 ntBASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
TRAV12-3A0A0B4J271 AP006437.1-201ENST00000641440 3685 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AC103710.2-202ENST00000641454 2853 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 DEFB108F-201ENST00000344638 222 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 RNU1-148P-201ENST00000384472 162 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AL512604.1-201ENST00000404812 257 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 RN7SKP101-201ENST00000411376 320 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AL109913.1-201ENST00000421173 514 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 MTCO1P42-201ENST00000457379 726 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AC069528.1-202ENST00000482888 637 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AL359273.1-201ENST00000510918 627 ntBASIC1.2□□□□□ -2.22
TRAV12-3A0A0B4J271 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms