Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 VN1R90P-201ENST00000595717 726 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AC040174.2-201ENST00000602701 465 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AC005229.3-201ENST00000603438 323 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AL161729.4-201ENST00000604650 476 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AC004853.1-201ENST00000604902 698 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AP001521.1-201ENST00000609150 300 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AC008443.7-201ENST00000622195 246 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 OR1S1-201ENST00000624470 978 ntBASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
TRAV12-1A0A0B4J245 AC004520.1-201ENST00000608362 1413 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 FTLP6-201ENST00000355274 422 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 RNU6-492P-201ENST00000363035 104 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 MIR217-201ENST00000384817 110 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 U3.26-201ENST00000391236 204 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 SNORA11.4-201ENST00000408823 129 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 TAF13P2-201ENST00000416876 286 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 HMGB1P49-201ENST00000418882 569 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 PPP1R11P2-201ENST00000423543 382 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 ZFAND6P1-201ENST00000434138 605 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 GPM6BP3-201ENST00000442797 145 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 GXYLT1P1-201ENST00000446657 490 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AC128713.1-201ENST00000471495 306 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 RPL23AP41-201ENST00000484754 458 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AC011825.1-201ENST00000484967 388 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AC098591.2-201ENST00000510152 315 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AC022447.1-201ENST00000515358 464 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 RNA5SP281-201ENST00000516504 135 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 MIR5089-201ENST00000580047 84 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 MIR3199-1-201ENST00000582434 88 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 MIR3158-1-201ENST00000583596 81 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AP001429.1-201ENST00000602568 530 ntBASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
TRAV12-1A0A0B4J245 AL354685.2-201ENST00000448218 1447 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 OR5J1P-201ENST00000313544 939 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 RNA5SP125-201ENST00000364843 120 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 RNU6-741P-201ENST00000383889 107 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 MIR218-1-201ENST00000384999 110 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 RNU6-750P-201ENST00000390946 107 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AL445529.1-201ENST00000398713 389 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AL109755.1-201ENST00000401791 649 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 EIF4EP4-201ENST00000424916 578 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 Z93242.1-201ENST00000427102 353 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 HMGB1P9-201ENST00000429856 646 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC107083.1-201ENST00000439643 279 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 COX6CP18-201ENST00000448769 222 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC068781.1-201ENST00000488231 618 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC118465.1-201ENST00000513820 1271 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 IGKV3-31-201ENST00000523109 329 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 MIR4443-201ENST00000585052 53 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AP003973.1-201ENST00000604639 691 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AC107214.2-201ENST00000608204 634 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AL161423.1-201ENST00000613700 262 ntBASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV12-1A0A0B4J245 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TRAV12-1A0A0B4J245 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
TRAV12-1A0A0B4J245 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
TRAV12-1A0A0B4J245 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV12-1A0A0B4J245 RNU6-792P-201ENST00000363490 107 ntBASIC1.33□□□□□ -2.2
TRAV12-1A0A0B4J245 RNU6-884P-201ENST00000363889 107 ntBASIC1.33□□□□□ -2.2
TRAV12-1A0A0B4J245 SNORA16.1-201ENST00000364597 132 ntBASIC1.33□□□□□ -2.2
TRAV12-1A0A0B4J245 RNU6-650P-201ENST00000365658 111 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms