Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 Y_RNA.450-201ENST00000384198 113 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 RNU6-780P-201ENST00000391030 104 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 MTHFD2P2-201ENST00000407725 247 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 RNU2-36P-201ENST00000410361 191 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 DUTP6-201ENST00000425573 462 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 MTATP6P4-201ENST00000427725 675 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AL445584.1-201ENST00000431451 330 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 RPS3AP46-201ENST00000448352 682 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 SNRPGP6-201ENST00000451124 220 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 HMGN2P7-201ENST00000456186 273 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 SNORD97-201ENST00000459187 142 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC106872.2-201ENST00000494303 480 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 RNU6-840P-201ENST00000517275 65 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 ERHP1-201ENST00000523006 310 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC008489.1-201ENST00000524271 483 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 OR5AQ1P-201ENST00000527596 927 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 OR4R1P-201ENST00000529879 463 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AP004242.1-201ENST00000533701 349 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AL359212.1-201ENST00000556608 614 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC009812.4-201ENST00000569134 1805 ntBASIC3.64□□□□□ -1.83
PKP3Q9Y446 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.64□□□□□ -1.83
PKP3Q9Y446 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PKP3Q9Y446 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 RNU6-1120P-201ENST00000362988 108 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 Y_RNA.248-201ENST00000364501 109 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 RNU1-39P-201ENST00000383897 165 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 MIR558-201ENST00000384920 94 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC110754.1-201ENST00000399740 601 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 TXNP7-201ENST00000406296 293 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 MIR1183-201ENST00000408856 89 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 MTND1P23-201ENST00000416931 372 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL035423.1-201ENST00000420331 213 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC245054.1-201ENST00000420944 258 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC006989.1-201ENST00000427212 131 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 OR2AS1P-201ENST00000427827 319 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 MED13P1-201ENST00000428342 171 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 FGF7P6-202ENST00000451282 293 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 ANP32BP2-201ENST00000454525 545 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 snoU13.4-201ENST00000458916 104 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC023141.12-201ENST00000512399 199 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 Y_RNA.693-201ENST00000516641 110 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 RNU6-1073P-201ENST00000517182 106 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 HMGB1P41-201ENST00000520234 440 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC007991.1-201ENST00000522680 631 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL512310.1-201ENST00000548639 172 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL512360.1-201ENST00000555346 234 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL606834.2-201ENST00000602954 668 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC006077.1-201ENST00000604746 343 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC112200.1-201ENST00000625015 234 ntBASIC3.63□□□□□ -1.83
PKP3Q9Y446 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PKP3Q9Y446 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.63□□□□□ -1.83
PKP3Q9Y446 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKP3Q9Y446 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKP3Q9Y446 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PKP3Q9Y446 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PKP3Q9Y446 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms