Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 U8.6-201ENST00000364939 135 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RNU5E-7P-201ENST00000365290 117 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 MT-TC-201ENST00000387405 66 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 GCNT1P4-201ENST00000404096 329 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RN7SKP17-201ENST00000411242 351 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RAB9AP3-201ENST00000412737 573 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC126120.1-201ENST00000431082 470 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC016712.1-201ENST00000431088 378 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 REG1CP-206ENST00000447469 496 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RAB9AP1-201ENST00000449393 573 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC118758.1-202ENST00000454719 225 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC098847.1-201ENST00000473094 348 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC018797.1-201ENST00000510791 255 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RNU6-927P-201ENST00000516199 100 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 IGKV2-19-201ENST00000518132 283 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 MIR4502-201ENST00000580432 81 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AP002826.1-201ENST00000608835 315 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC092266.1-201ENST00000610958 165 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 MIR6071-201ENST00000616741 78 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AL591926.1-201ENST00000620542 217 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC092628.2-201ENST00000622492 339 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC016745.2-201ENST00000608834 3443 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 AC007938.2-201ENST00000604666 2634 ntBASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS9D1Q9Y2B5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 SELENOWP1-201ENST00000322792 252 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 MIR450A1-201ENST00000362262 91 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 RNU6-235P-201ENST00000362644 107 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 SNORA51.9-201ENST00000384295 124 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 SNORA40.5-201ENST00000391061 128 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 ENSAP1-201ENST00000392855 326 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 HLFP1-201ENST00000402375 499 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 RPL21P67-201ENST00000402896 478 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 RNU2-43P-201ENST00000410306 190 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 CRIP1P1-201ENST00000427567 185 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 RPL7AP61-201ENST00000443410 636 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 MRPL48P1-201ENST00000445390 636 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AL031737.1-201ENST00000450125 223 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 FRG2FP-204ENST00000453982 852 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC018638.3-201ENST00000461273 132 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC093815.1-201ENST00000508637 280 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 MIR3121-201ENST00000579680 77 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 MIR4271-201ENST00000582451 67 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC048347.1-201ENST00000624621 427 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 MIR6844-201ENST00000637122 62 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 AC073869.8-201ENST00000641806 335 ntBASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS9D1Q9Y2B5 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 RNU6-294P-201ENST00000364999 102 ntBASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 RNU6-1286P-201ENST00000383871 107 ntBASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 RNU1-74P-201ENST00000384108 171 ntBASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 RPL35AP3-201ENST00000414680 288 ntBASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS9D1Q9Y2B5 AL627311.1-201ENST00000431514 115 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms