Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGB4Q9UN71 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 MTND5P29-201ENST00000458676 1807 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 U3.11-201ENST00000364476 212 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 RNU4-91P-201ENST00000364778 135 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC099548.1-201ENST00000421443 426 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC069157.1-201ENST00000421749 137 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AL356583.2-201ENST00000426536 280 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC137499.1-201ENST00000427602 88 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 MTATP6P30-201ENST00000443540 664 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 snoU13.28-201ENST00000459235 104 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 RBM43P1-201ENST00000476891 1081 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC138853.1-201ENST00000503549 823 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 SLC25A15P5-201ENST00000508033 253 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 RNU2-10P-201ENST00000516375 211 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 OSBPL9P5-201ENST00000542581 171 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC008088.1-201ENST00000580993 280 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 AC068057.2-201ENST00000624047 895 ntBASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGB4Q9UN71 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 OR1S2-201ENST00000302592 978 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 RNU4-21P-201ENST00000362802 126 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 MIR23A-201ENST00000385245 73 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 MIR888-201ENST00000401186 77 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 RNU2-8P-201ENST00000410727 190 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 RAC1P6-201ENST00000423911 575 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 MTATP6P17-201ENST00000431030 672 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 FCF1P1-201ENST00000432690 571 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 TRIM60P18-201ENST00000441518 828 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 COX6CP12-201ENST00000446748 202 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 SSXP1-201ENST00000453640 473 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 RPL37P6-201ENST00000460682 294 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 RN7SL432P-201ENST00000484057 298 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC006483.1-201ENST00000487308 313 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 MTND4LP22-201ENST00000508209 276 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC118465.1-201ENST00000513820 1271 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 MTND4LP31-201ENST00000514859 294 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 SNORA64.4-201ENST00000516632 81 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC107294.1-201ENST00000609524 467 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC103710.2-201ENST00000609912 942 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHGB4Q9UN71 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 AC099654.7-201ENST00000635788 2127 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 SNORD9-201ENST00000362566 104 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 RNU6-1167P-201ENST00000363227 94 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 Y_RNA.245-201ENST00000364493 95 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 RNY4P16-201ENST00000364768 94 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 CD24P4-201ENST00000382840 243 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 MT-TH-201ENST00000387441 69 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 MRPL42P2-201ENST00000403169 426 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 NDUFS5P1-201ENST00000405668 289 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 ATP5A1P2-201ENST00000412323 255 ntBASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHGB4Q9UN71 SEPT2P1-201ENST00000419651 180 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms