Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MIR2053-201ENST00000459295 91 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC026801.1-201ENST00000497178 464 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC009901.1-201ENST00000506703 541 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC093840.1-201ENST00000511599 336 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC026402.1-201ENST00000513642 170 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.708-201ENST00000516950 96 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC087854.1-201ENST00000519706 414 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC008489.1-201ENST00000524271 483 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AP001880.2-201ENST00000538233 448 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AL049555.1-201ENST00000562834 1933 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 RN7SL176P-201ENST00000580352 264 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MIR4680-201ENST00000580906 66 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 MIR4715-201ENST00000584117 79 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AL356218.2-201ENST00000605264 187 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC083806.3-201ENST00000614016 455 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 PLCE1P1-201ENST00000622094 305 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 AC068724.3-201ENST00000625906 87 ntBASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.08□□□□□ -1.76
CDC42EP3Q9UKI2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC009812.4-201ENST00000569134 1805 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 MTND4P1-201ENST00000457501 1466 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNA5SP388-201ENST00000362584 119 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNA5SP191-201ENST00000362585 102 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-1309P-201ENST00000363305 108 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-890P-201ENST00000384121 107 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 SNORA36C-201ENST00000384289 132 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 SNORA75.6-201ENST00000391318 127 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 MIR548F4-201ENST00000408515 105 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-985P-201ENST00000410182 104 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-1050P-201ENST00000410388 107 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RPL21P109-201ENST00000422213 475 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 MTATP6P4-201ENST00000427725 675 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC004975.1-201ENST00000428733 208 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AL591212.2-201ENST00000433923 257 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RPL26P6-201ENST00000440913 438 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 BTF3P6-201ENST00000448054 499 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AURKAPS2-201ENST00000454983 333 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 CYCSP34-201ENST00000458172 304 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RPL37P6-201ENST00000460682 294 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC104472.2-201ENST00000469035 601 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RPL31P60-201ENST00000478450 367 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC083829.1-201ENST00000503756 657 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 Y_RNA.670-201ENST00000516255 105 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-1332P-201ENST00000516666 104 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 RNU6-323P-201ENST00000521915 107 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 ERHP1-201ENST00000523006 310 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AL121603.1-201ENST00000553815 142 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 BDH2P1-201ENST00000602288 736 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC012119.1-201ENST00000603184 222 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AL354984.3-201ENST00000604803 325 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 CR381572.2-201ENST00000624852 397 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC138305.3-201ENST00000624988 240 ntBASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CDC42EP3Q9UKI2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 TLK1P1-201ENST00000456760 2440 ntBASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CDC42EP3Q9UKI2 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms