Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RN7SL807P-201ENST00000470923 297 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RBM43P1-201ENST00000476891 1081 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RPL32P34-201ENST00000486380 400 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 RN7SL504P-201ENST00000494496 287 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC108078.1-201ENST00000508073 725 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC017037.2-201ENST00000513850 890 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC087481.2-201ENST00000565492 330 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC107954.1-201ENST00000565906 727 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 DUXAP4-201ENST00000603046 613 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AL442067.2-201ENST00000614033 363 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC009268.2-201ENST00000621925 457 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC091953.2-201ENST00000623979 160 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AC048347.1-201ENST00000624621 427 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 MIR3651-201ENST00000630427 90 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.49□□□□□ -1.85
SIX4Q9UIU6 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
SIX4Q9UIU6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AF127577.6-201ENST00000623352 2191 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 OR4G2P-201ENST00000328113 903 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 RNU5E-1-201ENST00000362477 120 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 Y_RNA.333-201ENST00000365274 102 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 Y_RNA.554-201ENST00000384672 102 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 RNU6-114P-201ENST00000384704 105 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 MIR184-201ENST00000384962 84 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 BX679664.1-201ENST00000434429 253 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC104850.1-201ENST00000435940 476 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 ARPC3P1-201ENST00000437218 533 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL451074.3-201ENST00000437709 472 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 HMGB3P11-201ENST00000440127 604 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC055855.1-201ENST00000489563 579 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC011352.1-201ENST00000512300 793 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 RN7SKP60-201ENST00000516985 239 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC107934.1-201ENST00000522215 217 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AP000907.2-201ENST00000530827 353 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC124947.2-202ENST00000552735 133 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL391840.1-201ENST00000571144 367 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 MIR3118-1-201ENST00000581787 76 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 MIR4801-201ENST00000582704 82 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 BNIP3P22-201ENST00000593399 556 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AC011468.4-201ENST00000603942 409 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 BX664608.1-201ENST00000610519 487 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL157817.1-201ENST00000614264 790 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 AL158209.2-201ENST00000619266 216 ntBASIC3.48□□□□□ -1.85
SIX4Q9UIU6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
SIX4Q9UIU6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC011460.1-201ENST00000636268 1834 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC009902.3-201ENST00000606235 2172 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 Y_RNA.296-201ENST00000364930 108 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 RPL17P50-201ENST00000396131 546 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 RNU2-47P-201ENST00000410649 186 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 RNA5SP31-201ENST00000411144 127 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 EIF1P1-201ENST00000421436 341 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC019097.1-201ENST00000424783 735 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 FTH1P1-201ENST00000437933 532 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC004924.1-201ENST00000480160 781 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC110794.1-201ENST00000505816 425 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC109927.2-201ENST00000506416 303 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 RNU6-314P-201ENST00000516574 104 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 SCARNA20.6-201ENST00000517251 106 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX4Q9UIU6 OR5D17P-201ENST00000531492 978 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 SETP7-201ENST00000552169 453 ntBASIC3.47□□□□□ -1.85
SIX4Q9UIU6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 161.5 ms