Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 MIR5708-201ENST00000579723 85 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC007621.1-201ENST00000604544 437 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 MTND4LP5-201ENST00000605152 292 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 SCARNA17.4-201ENST00000614296 143 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AL603758.1-201ENST00000618654 241 ntBASIC2.18□□□□□ -2.06
VAPAQ9P0L0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VAPAQ9P0L0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 RNU5E-8P-201ENST00000363502 116 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 RN7SKP226-201ENST00000364912 300 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 RNU6-217P-201ENST00000384164 104 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AL031679.1-201ENST00000400616 525 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 RPL7P27-201ENST00000403775 720 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 MTCO2P5-201ENST00000422621 426 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 MTCO3P30-201ENST00000426425 670 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 Z80107.1-201ENST00000436830 412 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC018634.1-201ENST00000437554 401 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 MRPS17P3-201ENST00000465453 385 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC105252.1-201ENST00000503089 286 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC022634.1-201ENST00000520765 532 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC104417.1-201ENST00000523974 751 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 ISCA1P3-201ENST00000577104 373 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC243773.3-201ENST00000613270 256 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC002550.2-201ENST00000621246 394 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC068057.2-201ENST00000624047 895 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AL159972.1-201ENST00000625150 448 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC005539.1-201ENST00000443768 1479 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
VAPAQ9P0L0 AC022336.2-201ENST00000568966 2538 ntBASIC2.17□□□□□ -2.06
VAPAQ9P0L0 RNA5SP68-201ENST00000363885 119 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 RNU6-741P-201ENST00000383889 107 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 MIR196B-201ENST00000384852 84 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AL591416.1-201ENST00000404015 867 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 NUP35P1-201ENST00000422734 947 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC091390.3-201ENST00000426478 338 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 MTATP6P11-201ENST00000428071 670 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC233279.1-201ENST00000455300 423 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 RPS3AP14-201ENST00000483907 780 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 GZMAP1-201ENST00000503054 631 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC022447.3-201ENST00000506865 495 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 NDUFB4P2-201ENST00000509515 391 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 RNA5SP148-201ENST00000516527 94 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 RNU6-840P-201ENST00000517275 65 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC005951.2-201ENST00000576282 495 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 MIR5007-201ENST00000583098 95 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AL161729.4-201ENST00000604650 476 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC135507.2-201ENST00000612443 309 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC008498.1-201ENST00000613012 531 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 MIR6817-201ENST00000615588 66 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AC253576.2-201ENST00000618815 580 ntBASIC2.16□□□□□ -2.06
VAPAQ9P0L0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VAPAQ9P0L0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.06
VAPAQ9P0L0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
VAPAQ9P0L0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
VAPAQ9P0L0 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VAPAQ9P0L0 RNU1-52P-201ENST00000384190 164 ntBASIC2.15□□□□□ -2.07
VAPAQ9P0L0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms