Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.49□□□□□ -1.85
SMARCAL1Q9NZC9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 RNU6-359P-201ENST00000365466 108 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 U3.20-201ENST00000390909 217 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 PTMAP2-201ENST00000397627 327 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 MRPL42P2-201ENST00000403169 426 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC127391.1-201ENST00000411737 98 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AL139415.2-201ENST00000431968 163 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 HSPD1P21-201ENST00000436541 245 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC108734.1-201ENST00000439549 399 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 HMGB1P25-201ENST00000468402 607 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 RPS4XP13-201ENST00000483219 789 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 RPS3AP14-201ENST00000483907 780 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC106707.2-201ENST00000484182 374 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC055855.1-201ENST00000489563 579 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 HMGB3P15-201ENST00000507326 574 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 TMEM248P1-201ENST00000510579 951 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 RN7SKP13-201ENST00000515933 244 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC107954.1-201ENST00000565906 727 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC121334.2-201ENST00000605387 271 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC092954.2-201ENST00000609103 430 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AL161734.1-201ENST00000609720 557 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 BX664608.1-201ENST00000610519 487 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AC090970.3-201ENST00000612566 866 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AL133173.2-201ENST00000614270 90 ntBASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
SMARCAL1Q9NZC9 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC017071.1-201ENST00000564407 2204 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RNU5E-1-201ENST00000362477 120 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RNA5SP383-201ENST00000362934 120 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RNU4-1-201ENST00000363925 141 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 SNORA7.2-201ENST00000364446 145 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RNY4P16-201ENST00000364768 94 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 SNORD17-201ENST00000390930 237 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RNU6-821P-201ENST00000390995 107 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RPL23AP32-201ENST00000395315 459 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 BTF3P7-201ENST00000407097 488 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 MIR1250-201ENST00000408098 113 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC007283.2-201ENST00000424739 197 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 ISCA1P1-201ENST00000426679 387 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 MRPS10P2-201ENST00000431226 381 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 FCF1P1-201ENST00000432690 571 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 NEK4P1-201ENST00000433383 879 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC073063.1-201ENST00000434352 607 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AL662791.1-201ENST00000441992 928 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 Z99127.3-201ENST00000448158 395 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 KCTD9P5-201ENST00000504141 1170 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC010587.1-201ENST00000505809 469 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC017037.2-201ENST00000513850 890 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 RN7SKP116-201ENST00000516902 319 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 OR4R3P-201ENST00000525084 838 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 FAM92A1P1-201ENST00000528023 890 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AL133241.1-201ENST00000556832 487 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC074050.1-201ENST00000563247 211 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 NRBF2P1-201ENST00000587407 859 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 HMGN2P28-201ENST00000606102 262 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 MIR7851-201ENST00000610611 160 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC090517.2-201ENST00000614966 680 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 U4.5-201ENST00000617137 123 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 PLCE1P1-201ENST00000622094 305 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC034229.5-201ENST00000624258 185 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 AC011460.1-201ENST00000636268 1834 ntBASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.47□□□□□ -1.85
SMARCAL1Q9NZC9 MTCO1P24-201ENST00000515438 1558 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms