Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC123904.2-201ENST00000548059 300 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL157394.1-201ENST00000562983 1224 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 MTCO3P13-201ENST00000577757 781 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC005771.1-201ENST00000585581 349 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC009977.1-201ENST00000586015 570 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 HMGN1P30-201ENST00000589286 268 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL451086.1-201ENST00000605596 223 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC108747.1-201ENST00000609508 535 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 OR10AB1P-201ENST00000609613 938 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL355472.4-201ENST00000610233 626 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC008498.1-201ENST00000613012 531 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC012150.2-201ENST00000621300 544 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC112204.3-201ENST00000623822 332 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 MTND5P33-201ENST00000571250 1450 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
NDE1Q9NXR1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NDE1Q9NXR1 AC244517.1-201ENST00000606030 2086 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NDE1Q9NXR1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3□□□□□ -1.93
NDE1Q9NXR1 RNU6-335P-201ENST00000364563 113 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
NDE1Q9NXR1 U3.20-201ENST00000390909 217 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 SNORA11.1-201ENST00000408133 129 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 RNU6-195P-201ENST00000411352 109 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AL663109.1-201ENST00000411498 844 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3□□□□□ -1.93
NDE1Q9NXR1 SSXP9-201ENST00000417503 292 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 RPL21P32-201ENST00000419877 477 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 MTND1P27-201ENST00000451117 902 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 GSTA11P-201ENST00000452866 669 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3□□□□□ -1.93
NDE1Q9NXR1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3□□□□□ -1.93
NDE1Q9NXR1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 NDUFB4P2-201ENST00000509515 391 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 SNORD59.2-201ENST00000516873 68 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 RNU6-528P-201ENST00000516926 100 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 RNU6-1003P-201ENST00000517099 105 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AP003181.2-201ENST00000528941 181 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC022878.1-201ENST00000530684 149 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3□□□□□ -1.93
NDE1Q9NXR1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3□□□□□ -1.93
NDE1Q9NXR1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3□□□□□ -1.93
NDE1Q9NXR1 MIR3913-1-201ENST00000577744 102 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 MIR3158-1-201ENST00000583596 81 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 MIR4276-201ENST00000584832 70 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3□□□□□ -1.93
NDE1Q9NXR1 AC087683.1-201ENST00000591187 441 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3□□□□□ -1.93
NDE1Q9NXR1 AC023043.3-201ENST00000593113 385 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC078795.2-201ENST00000602835 1252 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AL031176.1-201ENST00000604554 466 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC138749.5-201ENST00000611461 208 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC131902.3-201ENST00000611767 581 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3□□□□□ -1.93
NDE1Q9NXR1 AC116165.2-201ENST00000616705 206 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AC138932.5-201ENST00000617759 563 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 AL356585.4-201ENST00000623078 1229 ntBASIC3□□□□□ -1.93
NDE1Q9NXR1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NDE1Q9NXR1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3□□□□□ -1.93
NDE1Q9NXR1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RNU4-35P-201ENST00000362588 141 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RNU6-359P-201ENST00000365466 108 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 PTMAP2-201ENST00000397627 327 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RNA5SP129-201ENST00000410276 118 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 MTCO3P41-201ENST00000414801 328 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RPL21P66-201ENST00000426566 466 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC104332.2-201ENST00000429959 156 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RPS24P1-201ENST00000438550 371 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC108734.1-201ENST00000439549 399 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC244505.5-201ENST00000443639 207 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 RPL39P40-201ENST00000445481 146 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.99□□□□□ -1.93
NDE1Q9NXR1 snoU13.22-201ENST00000459428 104 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 SNORD42A-201ENST00000459584 64 ntBASIC2.99□□□□□ -1.93
NDE1Q9NXR1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms