Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 RNU5E-6P-201ENST00000365574 115 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 Y_RNA.517-201ENST00000384551 106 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL513331.1-201ENST00000411908 397 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC245054.1-201ENST00000420944 258 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 RAC1P6-201ENST00000423911 575 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 RPL7P2-201ENST00000427639 268 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL590383.1-201ENST00000428602 75 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC133104.1-201ENST00000429100 218 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL158071.1-201ENST00000430315 461 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 NDUFB4P6-201ENST00000436819 366 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 SETP5-201ENST00000437270 562 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 SNRPGP6-201ENST00000451124 220 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 SNORA84-201ENST00000459229 133 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL133162.1-201ENST00000463228 453 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 RN7SL432P-201ENST00000484057 298 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 VN1R105P-201ENST00000486595 910 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL358832.1-201ENST00000497800 389 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC105252.1-201ENST00000503089 286 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC091133.4-201ENST00000511142 308 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-1231P-201ENST00000517185 103 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 DUXAP2-201ENST00000519198 589 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AP003072.2-201ENST00000527756 676 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC004024.1-201ENST00000549244 247 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 MIR4286-201ENST00000580651 93 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 AC087241.4-201ENST00000612441 480 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 ZNF807-201ENST00000328088 1707 ntBASIC3.39□□□□□ -1.87
SLC6A13Q9NSD5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-169P-201ENST00000365336 107 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AP002088.1-201ENST00000382740 395 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-259P-201ENST00000383999 107 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 NDUFS5P1-201ENST00000405668 289 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AL591034.1-201ENST00000407447 340 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 U3.39-201ENST00000408569 239 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 BX842559.1-201ENST00000419615 532 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 FCF1P1-201ENST00000432690 571 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 TAAR7P-201ENST00000436141 242 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 MTATP6P30-201ENST00000443540 664 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 SAP18P1-201ENST00000512058 390 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-1092P-201ENST00000516955 87 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RNU6-1220P-201ENST00000517126 108 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC023632.4-201ENST00000517783 191 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC026333.2-201ENST00000542164 106 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RPS3AP4-201ENST00000555161 764 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 GLUD1P4-201ENST00000590914 418 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC068880.5-201ENST00000624331 290 ntBASIC3.38□□□□□ -1.87
SLC6A13Q9NSD5 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms