Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AP000776.1-201ENST00000530032 1663 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 MTND5P25-201ENST00000430499 799 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 HMGB1P31-201ENST00000437242 427 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 FAM103A2P-201ENST00000444122 354 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC133963.2-201ENST00000513686 578 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 HMGB1P1-201ENST00000522557 636 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 MIR4255-201ENST00000579351 72 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 MIR3162-201ENST00000581818 82 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 XIAPP1-201ENST00000603162 600 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC010678.1-201ENST00000614118 713 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 MIR7973-1-201ENST00000614683 76 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC020763.5-201ENST00000623298 430 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 ZNF72P-201ENST00000425869 1908 ntBASIC0.97□□□□□ -2.25
SMCO4Q9NRQ5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 CBX3P1-201ENST00000325243 554 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 RNU1-72P-201ENST00000362976 153 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 SNORD14B-201ENST00000364533 90 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AC105402.1-201ENST00000413336 545 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AL591704.2-201ENST00000421658 181 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AC092648.1-201ENST00000425870 423 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 RPL31P50-201ENST00000471002 296 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AC021146.7-201ENST00000509604 775 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 SNORA25.15-201ENST00000516487 89 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AL445493.3-201ENST00000619568 477 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 AP006248.3-201ENST00000623580 594 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 LINC02211-204ENST00000642024 1070 ntBASIC0.96□□□□□ -2.26
SMCO4Q9NRQ5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 RNU6-666P-201ENST00000363499 107 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 RNU6-618P-201ENST00000363518 112 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 RNU6-338P-201ENST00000383888 105 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 MIR491-201ENST00000384877 84 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 RNA5SP171-201ENST00000391071 115 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC092393.1-201ENST00000439625 742 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 BNIP3P2-201ENST00000441221 577 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC139453.3-201ENST00000493276 369 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 PCNAP1-201ENST00000505363 709 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AL009028.1-201ENST00000604895 802 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC103810.8-201ENST00000607347 118 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AP003400.5-201ENST00000624827 617 ntBASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.95□□□□□ -2.26
SMCO4Q9NRQ5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC007785.2-201ENST00000598627 1916 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 MIR504-201ENST00000385065 83 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 TPTE2P6-202ENST00000445572 1007 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC079448.1-201ENST00000449377 373 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 snoU13.28-201ENST00000459235 104 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC104687.1-201ENST00000485829 412 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC104108.1-201ENST00000509930 412 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AL355877.2-201ENST00000603670 358 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC027309.3-201ENST00000623419 351 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AL049737.1-201ENST00000413920 1403 ntBASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SMCO4Q9NRQ5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL359893.1-201ENST00000447628 1580 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 SNORA8-201ENST00000384574 139 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 U3.26-201ENST00000391236 204 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL627390.1-201ENST00000396055 340 ntBASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC0.93□□□□□ -2.26
SMCO4Q9NRQ5 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms