Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC079600.2-201ENST00000550076 130 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 HMGB1P6-201ENST00000569046 646 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC138761.3-201ENST00000579993 334 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 RNU6-88P-201ENST00000606801 100 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC004696.1-201ENST00000614345 607 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC092447.10-201ENST00000620607 1652 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC005832.2-201ENST00000538921 1430 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 AC008568.2-201ENST00000623862 2313 ntBASIC3.01□□□□□ -1.93
HPS4Q9NQG7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
HPS4Q9NQG7 AC011460.1-201ENST00000636268 1834 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 MAPK10-266ENST00000641066 6555 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3□□□□□ -1.93
HPS4Q9NQG7 RNU5E-8P-201ENST00000363502 116 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3□□□□□ -1.93
HPS4Q9NQG7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HPS4Q9NQG7 RNA5SP184-201ENST00000411071 108 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 RNA5SP344-201ENST00000411081 104 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
HPS4Q9NQG7 NUP35P1-201ENST00000422734 947 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 TMEM167AP1-201ENST00000423409 219 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AC093151.1-201ENST00000427711 313 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AL117351.1-201ENST00000438864 766 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3□□□□□ -1.93
HPS4Q9NQG7 Z73417.1-201ENST00000447373 778 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3□□□□□ -1.93
HPS4Q9NQG7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3□□□□□ -1.93
HPS4Q9NQG7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
HPS4Q9NQG7 RNA5SP216-201ENST00000516111 123 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 UBTFL10-201ENST00000528532 562 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3□□□□□ -1.93
HPS4Q9NQG7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3□□□□□ -1.93
HPS4Q9NQG7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3□□□□□ -1.93
HPS4Q9NQG7 MTATP6P24-201ENST00000576835 677 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 RPL23AP88-201ENST00000605759 454 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 AC009039.2-201ENST00000624524 529 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
HPS4Q9NQG7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3□□□□□ -1.93
HPS4Q9NQG7 AC108206.1-201ENST00000570186 4159 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3□□□□□ -1.93
HPS4Q9NQG7 AP000526.1-201ENST00000603308 1388 ntBASIC3□□□□□ -1.93
HPS4Q9NQG7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 RNU5A-1-201ENST00000362698 116 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 RNU6-301P-201ENST00000384277 107 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 RNU6-114P-201ENST00000384704 105 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AL592148.1-201ENST00000413568 445 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 LSM1P1-201ENST00000438629 273 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC112653.1-201ENST00000443851 386 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AL109933.2-201ENST00000452651 260 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AL590639.1-201ENST00000456484 337 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 HSPE1P6-201ENST00000479457 291 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 RN7SL432P-201ENST00000484057 298 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AP001025.2-201ENST00000490908 477 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC147055.4-201ENST00000504399 745 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC023050.2-201ENST00000544968 387 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC011260.1-201ENST00000578420 472 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 NRBF2P5-201ENST00000603087 788 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC013244.3-201ENST00000605614 388 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC063944.3-201ENST00000609969 533 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC131902.3-201ENST00000611767 581 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AC084035.1-201ENST00000634543 607 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 AL136360.1-201ENST00000503377 1900 ntBASIC2.99□□□□□ -1.93
HPS4Q9NQG7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HPS4Q9NQG7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.98□□□□□ -1.93
HPS4Q9NQG7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HPS4Q9NQG7 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HPS4Q9NQG7 RNU6-931P-201ENST00000363850 107 ntBASIC2.98□□□□□ -1.93
HPS4Q9NQG7 SNORA9.2-201ENST00000365361 133 ntBASIC2.98□□□□□ -1.93
HPS4Q9NQG7 RNU6-637P-201ENST00000384050 107 ntBASIC2.98□□□□□ -1.93
HPS4Q9NQG7 SNORA36C-201ENST00000384289 132 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms