Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 HMGB3P11-201ENST00000440127 604 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 VN1R34P-201ENST00000447387 883 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RPL21P129-201ENST00000491732 478 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RPL23AP55-201ENST00000498163 452 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC105252.1-201ENST00000503089 286 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC010587.1-201ENST00000505809 469 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 SNORA64.4-201ENST00000516632 81 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 MIR4429-201ENST00000580105 73 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 XIAPP1-201ENST00000603162 600 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AL158211.4-201ENST00000606988 584 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC006023.2-201ENST00000609916 167 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC095031.1-201ENST00000623685 672 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 AC244517.1-201ENST00000606030 2086 ntBASIC3.46□□□□□ -1.86
PCDH9Q9HC56 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDH9Q9HC56 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AL021368.2-201ENST00000606125 5352 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RNA5SP383-201ENST00000362934 120 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RNA5SP50-201ENST00000363731 107 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 HMGN1P24-201ENST00000412282 298 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 FCF1P9-201ENST00000412546 282 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 OR1AA1P-201ENST00000419597 916 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC244098.2-201ENST00000422068 99 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC007283.2-201ENST00000424739 197 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 C8orf59P1-201ENST00000429930 303 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 MTND1P1-201ENST00000445453 368 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 TPT1P14-201ENST00000448018 505 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 HMGN2P16-201ENST00000456802 261 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RPL21P104-201ENST00000464143 478 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RBM43P1-201ENST00000476891 1081 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RN7SL293P-201ENST00000481765 281 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RPL23AP41-201ENST00000484754 458 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RPL9P6-201ENST00000492764 598 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RNU6-314P-201ENST00000516574 104 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RN7SKP289-201ENST00000517244 295 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 SCARNA20.6-201ENST00000517251 106 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 MTCO2P4-201ENST00000517968 247 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 IGKV2-26-201ENST00000518305 343 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 DEFB108A-201ENST00000530110 222 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC007458.1-201ENST00000542812 373 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC005476.1-201ENST00000554427 397 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AL391840.1-201ENST00000571144 367 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 MIR3146-201ENST00000580367 79 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 SNRPGP15-201ENST00000600149 222 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 MIR98-201ENST00000606724 119 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AF250324.2-201ENST00000608299 610 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 TUG1_1.1-201ENST00000610654 145 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC090970.3-201ENST00000612566 866 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AL158209.2-201ENST00000619266 216 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 OR5H6-203ENST00000642105 978 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 AC092326.2-201ENST00000624772 1561 ntBASIC3.45□□□□□ -1.86
PCDH9Q9HC56 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDH9Q9HC56 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 RNU5E-1-201ENST00000362477 120 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 RNA5SP119-201ENST00000362715 117 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.44□□□□□ -1.86
PCDH9Q9HC56 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDH9Q9HC56 RNU2-8P-201ENST00000410727 190 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms