Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC091979.2-201ENST00000607514 214 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 LINC00901.1-201ENST00000617252 152 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AL161637.1-201ENST00000622380 412 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 AC093775.1-201ENST00000624154 1868 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.13□□□□□ -1.75
SEC61A2Q9H9S3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC074029.4-201ENST00000624796 1859 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-989P-201ENST00000362756 107 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-339P-201ENST00000384310 107 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 MT-TC-201ENST00000387405 66 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.645-201ENST00000391229 102 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RPS4XP7-201ENST00000406274 780 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RN7SKP106-201ENST00000410832 272 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RPL37P18-201ENST00000411602 243 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL160275.2-201ENST00000412010 394 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RPL31P2-201ENST00000413849 377 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RPLP0P7-201ENST00000416050 667 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC008267.5-201ENST00000424928 265 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL669831.1-202ENST00000428504 417 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL353597.2-202ENST00000434901 373 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC016831.4-201ENST00000438302 307 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 HMGB1P12-201ENST00000438594 598 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 GAPDHP27-201ENST00000447427 1020 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC073264.2-201ENST00000448886 166 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC008481.1-201ENST00000463278 396 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC087884.1-201ENST00000469738 328 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC010631.1-201ENST00000474150 156 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 MTND4LP22-201ENST00000508209 276 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC113195.1-201ENST00000579952 141 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL670379.6-201ENST00000603753 252 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL031176.1-201ENST00000604554 466 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL670379.1-201ENST00000604752 252 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL670379.5-201ENST00000605253 252 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL670379.8-201ENST00000605353 252 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AL670379.7-201ENST00000605823 252 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 SNHG22-203ENST00000617833 660 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC110801.1-201ENST00000623590 212 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 ZFRP1-201ENST00000457579 2970 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 AC103710.2-202ENST00000641454 2853 ntBASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SEC61A2Q9H9S3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC006971.1-201ENST00000407916 4486 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL359893.1-201ENST00000447628 1580 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.80-201ENST00000362996 102 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-450P-201ENST00000364654 107 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-715P-201ENST00000365204 103 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.389-201ENST00000383924 113 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.485-201ENST00000384395 102 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 Y_RNA.512-201ENST00000384518 102 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 MIR195-201ENST00000385194 87 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RNU6-328P-201ENST00000390887 106 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL583834.1-201ENST00000406943 343 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 CEACAMP6-201ENST00000452007 574 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AL583843.1-201ENST00000456070 346 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 RNU7-167P-201ENST00000459160 62 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC103987.1-201ENST00000473394 348 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC010655.3-201ENST00000478818 450 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 VN1R105P-201ENST00000486595 910 ntBASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.11□□□□□ -1.75
SEC61A2Q9H9S3 AC022493.2-201ENST00000506122 481 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms