Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 HMGB3P11-201ENST00000440127 604 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 FAM103A2P-201ENST00000444122 354 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 RPL21P23-201ENST00000446654 460 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AL163973.1-201ENST00000484753 577 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 RPS26P15-201ENST00000488067 348 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS11Q9H270 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC023141.12-201ENST00000512399 199 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 RNU6-764P-201ENST00000516396 105 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC107934.1-201ENST00000522215 217 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AP003497.1-201ENST00000528472 562 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 SETP2-201ENST00000553886 926 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 MIR4646-201ENST00000580775 63 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 MIR3942-201ENST00000585264 109 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC006254.3-201ENST00000603353 884 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC011468.4-201ENST00000603942 409 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC133644.2-201ENST00000608142 540 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AL390240.1-201ENST00000612950 384 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS11Q9H270 AC068870.2-201ENST00000620635 389 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 AC008785.1-201ENST00000624475 456 ntBASIC4.39□□□□□ -1.71
VPS11Q9H270 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
VPS11Q9H270 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS11Q9H270 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS11Q9H270 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS11Q9H270 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 AP004289.2-201ENST00000444413 1457 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS11Q9H270 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS11Q9H270 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS11Q9H270 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS11Q9H270 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS11Q9H270 XIAPP3-201ENST00000312918 795 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 Y_RNA.5-201ENST00000362334 102 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 Y_RNA.100-201ENST00000363141 102 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 RNU6-1155P-201ENST00000363554 107 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 RNU6-1097P-201ENST00000363586 107 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 AC117470.1-201ENST00000381974 330 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 MIR548K-201ENST00000408406 116 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS11Q9H270 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS11Q9H270 RPL7L1P10-201ENST00000427790 463 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 FTH1P6-201ENST00000430768 320 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS11Q9H270 RPS24P13-201ENST00000442520 397 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 AC104308.1-201ENST00000454621 333 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 TRBV1-201ENST00000476502 284 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 HMGB1P22-201ENST00000505315 124 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS11Q9H270 OR7H2P-201ENST00000513483 306 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 Y_RNA.682-201ENST00000516457 100 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 SCARNA24.1-201ENST00000516465 137 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 RNU6-1088P-201ENST00000516850 104 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS11Q9H270 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS11Q9H270 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS11Q9H270 MIR3934-201ENST00000579806 107 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 MIR4737-201ENST00000583979 81 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 SNORD84-203ENST00000584275 78 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 AP001029.3-201ENST00000588063 596 ntBASIC4.38□□□□□ -1.71
VPS11Q9H270 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VPS11Q9H270 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS11Q9H270 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS11Q9H270 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS11Q9H270 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
VPS11Q9H270 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS11Q9H270 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
VPS11Q9H270 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS11Q9H270 AC008725.1-201ENST00000605123 2263 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS11Q9H270 SNORA58B-201ENST00000364259 136 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 Y_RNA.257-201ENST00000364596 102 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 RNA5SP235-201ENST00000365411 114 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS11Q9H270 Y_RNA.527-201ENST00000384573 102 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 MIR298-201ENST00000401212 88 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 MRPL42P3-201ENST00000401492 326 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AL109941.1-201ENST00000401925 229 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 RNU6-193P-201ENST00000410977 107 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 MCFD2P1-201ENST00000417812 300 ntBASIC4.37□□□□□ -1.71
VPS11Q9H270 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS11Q9H270 RPL21P112-201ENST00000434403 463 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms