Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC025034.2-201ENST00000623264 286 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RNF38Q9H0F5 AC139769.1-204ENST00000472297 1931 ntBASIC4.62□□□□□ -1.67
RNF38Q9H0F5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 MAPK10-286ENST00000641208 8747 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RNA5SP151-201ENST00000365632 117 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RNU6-26P-201ENST00000383985 107 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RNU6-310P-201ENST00000384655 107 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AL583834.1-201ENST00000406943 343 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RNU6-985P-201ENST00000410182 104 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 Z74021.1-201ENST00000423610 407 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RAC1P6-201ENST00000423911 575 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC093106.2-201ENST00000428212 385 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC004975.1-201ENST00000428733 208 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 USP9YP16-201ENST00000430287 407 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AL731563.1-201ENST00000442202 214 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AL162388.1-201ENST00000450912 352 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 USP9YP23-201ENST00000455085 407 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 SNORD121B-201ENST00000458838 81 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RNA5SP446-201ENST00000515955 82 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC009902.1-201ENST00000519351 183 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 CR383656.7-201ENST00000548164 174 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RNF138P2-201ENST00000603490 592 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC079587.1-201ENST00000603846 277 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AL031176.1-201ENST00000604554 466 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 AC113403.1-201ENST00000604910 193 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 uc_338.13-201ENST00000618243 179 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 NXPH1-205ENST00000602349 1953 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.61□□□□□ -1.67
RNF38Q9H0F5 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
RNF38Q9H0F5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 RNU6-1287P-201ENST00000362914 107 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 SNORD115-7-201ENST00000365306 82 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC117470.1-201ENST00000381974 330 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 SNORA24.1-201ENST00000384401 135 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.527-201ENST00000384573 102 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 RNU6-1060P-201ENST00000384664 107 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.557-201ENST00000384680 107 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.576-201ENST00000384781 102 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 SNORA11F-201ENST00000408237 128 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 Y_RNA.646-201ENST00000410980 101 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 POLHP1-201ENST00000411806 470 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 VDAC1P9-201ENST00000412766 841 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 RPL21P91-201ENST00000429231 479 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 CBX3P6-201ENST00000430257 527 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AL035666.1-201ENST00000446195 348 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AL445433.1-201ENST00000457507 257 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 RNU7-59P-201ENST00000459101 61 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC105137.1-201ENST00000484355 562 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC017037.2-201ENST00000513850 890 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 RNU6-123P-201ENST00000516163 102 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 RN7SKP21-201ENST00000516503 220 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AL137161.1-201ENST00000532231 390 ntBASIC4.6□□□□□ -1.67
RNF38Q9H0F5 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF38Q9H0F5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms