Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.32□□□□□ -1.56
CNTNAP3BQ96NU0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 SNORD63-201ENST00000384262 68 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 MT-TC-201ENST00000387405 66 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 SNORA40-201ENST00000388090 126 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 PIGFP3-201ENST00000441918 722 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AC023424.1-201ENST00000496058 459 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AP002001.1-203ENST00000534002 267 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AC023824.2-201ENST00000566185 400 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AC069307.1-201ENST00000602820 447 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AL008718.3-201ENST00000610217 321 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AP005432.1-201ENST00000580891 3485 ntBASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.31□□□□□ -1.56
CNTNAP3BQ96NU0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AP005435.3-201ENST00000531260 3198 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AC020633.1-201ENST00000468439 2247 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 SNORA17.1-201ENST00000362945 126 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 MIR433-201ENST00000384837 93 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 RNU6-821P-201ENST00000390995 107 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AL591043.1-201ENST00000432461 424 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 GAPDHP27-201ENST00000447427 1020 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 SNORD2.1-201ENST00000458762 69 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 RNU6-1012P-201ENST00000516606 109 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AC087369.1-201ENST00000520775 996 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 MIR6130-201ENST00000619419 109 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 AL359955.1-201ENST00000455242 3275 ntBASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CNTNAP3BQ96NU0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 AC027228.2-201ENST00000567141 2154 ntBASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 RNA5SP453-201ENST00000362503 119 ntBASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 RNU1-64P-201ENST00000365443 163 ntBASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 RNA5SP332-201ENST00000391063 115 ntBASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 OR2AM1P-201ENST00000422137 422 ntBASIC5.29□□□□□ -1.56
CNTNAP3BQ96NU0 AC092573.2-201ENST00000434546 243 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms