Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 Y_RNA.280-201ENST00000364765 112 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 RPL37P25-201ENST00000507308 276 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 AC104229.1-201ENST00000561364 255 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.14□□□□□ -2.23
CFAP54Q96N23 CENPCP1-201ENST00000533085 2578 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 AC074117.2-201ENST00000417130 397 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.14□□□□□ -2.23
CFAP54Q96N23 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CFAP54Q96N23 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.14□□□□□ -2.23
CFAP54Q96N23 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CFAP54Q96N23 MRPS36P1-201ENST00000421291 307 ntBASIC1.13□□□□□ -2.23
CFAP54Q96N23 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.13□□□□□ -2.23
CFAP54Q96N23 AC090096.1-201ENST00000489168 390 ntBASIC1.13□□□□□ -2.23
CFAP54Q96N23 RPS27AP18-201ENST00000515536 459 ntBASIC1.13□□□□□ -2.23
CFAP54Q96N23 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CFAP54Q96N23 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.13□□□□□ -2.23
CFAP54Q96N23 CST2P1-201ENST00000425770 87 ntBASIC1.13□□□□□ -2.23
CFAP54Q96N23 UBE2V1P13-201ENST00000436983 439 ntBASIC1.13□□□□□ -2.23
CFAP54Q96N23 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.13□□□□□ -2.23
CFAP54Q96N23 SUMO2P12-201ENST00000405924 140 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 RPL27AP8-201ENST00000424277 446 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 RPL7P34-201ENST00000433316 712 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 AL356118.1-201ENST00000635272 1078 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC008669.1-201ENST00000565823 2178 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CFAP54Q96N23 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC004854.1-201ENST00000440356 349 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC093801.2-201ENST00000503966 1050 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 CYCSP23-201ENST00000519781 313 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CFAP54Q96N23 PTGES3P5-201ENST00000455109 434 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 AC233266.2-201ENST00000567067 528 ntBASIC1.12□□□□□ -2.23
CFAP54Q96N23 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.12□□□□□ -2.23
CFAP54Q96N23 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CFAP54Q96N23 RNU4-52P-201ENST00000384209 138 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.11□□□□□ -2.23
CFAP54Q96N23 SNX5P1-201ENST00000505757 1041 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AC103833.1-201ENST00000517442 172 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 ACTR3BP3-201ENST00000565577 979 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AC211469.2-201ENST00000605461 205 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AC018754.1-201ENST00000607486 925 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AC090517.3-201ENST00000625170 141 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 HMGB1P49-201ENST00000418882 569 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.11□□□□□ -2.23
CFAP54Q96N23 ZNF965P-201ENST00000432501 817 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 AC012181.1-201ENST00000479895 423 ntBASIC1.11□□□□□ -2.23
CFAP54Q96N23 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.11□□□□□ -2.23
CFAP54Q96N23 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CFAP54Q96N23 SNRPGP3-201ENST00000469405 227 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 OR4V1P-201ENST00000525394 1140 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 AC009229.3-201ENST00000608056 282 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 AC011330.2-201ENST00000621680 635 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 RNU1-52P-201ENST00000384190 164 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 RNU6-603P-201ENST00000411403 107 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 MTND2P9-201ENST00000422293 931 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 IPO7P1-201ENST00000442031 636 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 APOOP3-201ENST00000536787 586 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 AC006270.3-201ENST00000605967 1036 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 SNHG22-203ENST00000617833 660 ntBASIC1.1□□□□□ -2.23
CFAP54Q96N23 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CFAP54Q96N23 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.1□□□□□ -2.23
CFAP54Q96N23 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CFAP54Q96N23 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 RNU2-37P-201ENST00000410695 177 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 AC016691.1-201ENST00000441321 413 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.09□□□□□ -2.23
CFAP54Q96N23 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.09□□□□□ -2.23
CFAP54Q96N23 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.09□□□□□ -2.23
CFAP54Q96N23 AL512605.2-201ENST00000592972 256 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CFAP54Q96N23 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CFAP54Q96N23 Y_RNA.412-201ENST00000384001 104 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 AC000111.3-201ENST00000433478 193 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.09□□□□□ -2.23
CFAP54Q96N23 MTCO2P9-201ENST00000503214 694 ntBASIC1.09□□□□□ -2.23
CFAP54Q96N23 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms