Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MIR3653-201ENST00000625572 110 ntBASIC3.6□□□□□ -1.83
ZNF48Q96MX3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 CYP3A51P-201ENST00000633513 256 ntBASIC3.6□□□□□ -1.83
ZNF48Q96MX3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
ZNF48Q96MX3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AF127577.6-201ENST00000623352 2191 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RNA5SP388-201ENST00000362584 119 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 U3.12-201ENST00000364498 214 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RNA5SP189-201ENST00000364920 115 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RNU6-39P-201ENST00000384344 107 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 MIR93-201ENST00000385024 80 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 MIR454-201ENST00000390180 115 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AL356057.3-201ENST00000402607 340 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AL592114.1-201ENST00000403842 483 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RN7SKP235-201ENST00000410662 305 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RN7SKP27-201ENST00000410684 333 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RNA5SP39-201ENST00000411245 120 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC113618.1-201ENST00000416747 285 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RPL23AP25-201ENST00000430973 463 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 OR4C10P-201ENST00000434991 931 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AP003730.1-201ENST00000524605 285 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AP005435.4-201ENST00000529514 284 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 OR5D17P-201ENST00000531492 978 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 NCAPGP2-201ENST00000557911 754 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC074050.1-201ENST00000563247 211 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 MIR3668-201ENST00000582138 75 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC068790.3-201ENST00000602988 553 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC006006.1-201ENST00000603082 144 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 XIAPP1-201ENST00000603162 600 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 RPL23AP92-201ENST00000603609 255 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC113403.1-201ENST00000604910 193 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AL121992.2-201ENST00000606262 256 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AC019193.3-201ENST00000609144 554 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 MIR6891-201ENST00000618788 93 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 AL161637.1-201ENST00000622380 412 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 SAGE4P-201ENST00000442271 3381 ntBASIC3.59□□□□□ -1.83
ZNF48Q96MX3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
ZNF48Q96MX3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ZNF48Q96MX3 ZNF734P-201ENST00000419494 1534 ntBASIC3.59□□□□□ -1.84
ZNF48Q96MX3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
ZNF48Q96MX3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.59□□□□□ -1.84
ZNF48Q96MX3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.59□□□□□ -1.84
ZNF48Q96MX3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.31-201ENST00000362574 102 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RNU6-552P-201ENST00000362869 119 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 Y_RNA.234-201ENST00000364409 97 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RNU4-66P-201ENST00000365199 138 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RNU6-196P-201ENST00000384315 107 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RPS26P8-201ENST00000393490 348 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RNU4-78P-201ENST00000410940 126 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 PMCHL1-202ENST00000423102 261 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AL590233.1-201ENST00000430017 456 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 TIMM9P1-201ENST00000436122 256 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AC108734.1-201ENST00000439549 399 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF48Q96MX3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms