Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 MTND1P32-201ENST00000433043 938 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 LSM1P1-201ENST00000438629 273 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC092798.1-201ENST00000458542 409 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 RPL21P41-201ENST00000459863 264 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL135752.1-201ENST00000479477 471 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL049873.1-201ENST00000480540 376 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC147055.4-201ENST00000504399 745 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC023050.2-201ENST00000544968 387 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL355836.1-201ENST00000555951 870 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AL033523.1-201ENST00000605153 153 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC093838.1-201ENST00000613014 469 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AP002782.1-201ENST00000623107 614 ntBASIC3.02□□□□□ -1.93
ZNF560Q96MR9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
ZNF560Q96MR9 AC022336.2-201ENST00000568966 2538 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RNU6-931P-201ENST00000363850 107 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RNU6-270P-201ENST00000364131 105 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RNU6-853P-201ENST00000364306 107 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 MIR1305-201ENST00000408300 86 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 Z85995.1-201ENST00000415547 335 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC109583.1-201ENST00000432156 268 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AL512844.2-201ENST00000433990 593 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RSU1P2-202ENST00000437884 485 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AL513043.1-201ENST00000439124 535 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 SNORD11.1-201ENST00000459482 85 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AP001486.1-201ENST00000463339 476 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC135721.1-201ENST00000497954 479 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC091951.3-201ENST00000504093 246 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC022447.3-201ENST00000506865 495 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 MTCYBP43-201ENST00000513621 740 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RNU1-103P-201ENST00000516502 125 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RNU6-840P-201ENST00000517275 65 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 CYCSP39-201ENST00000565821 309 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC072039.2-201ENST00000608883 439 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC090115.4-201ENST00000609970 188 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 AC099063.3-201ENST00000642066 185 ntBASIC3.01□□□□□ -1.93
ZNF560Q96MR9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZNF560Q96MR9 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF560Q96MR9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF560Q96MR9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF560Q96MR9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZNF560Q96MR9 OR5J1P-201ENST00000313544 939 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 MIR26A1-201ENST00000362205 77 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 RNA5SP139-201ENST00000364340 117 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 RNU6-723P-201ENST00000383973 107 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 RNU6-432P-201ENST00000384196 109 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 MIR325-201ENST00000385260 98 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AL451074.5-201ENST00000415894 435 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AL139281.1-201ENST00000422120 335 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC092047.1-201ENST00000424997 240 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AL390023.1-201ENST00000428836 262 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AL035407.1-201ENST00000429211 571 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 CBWD4P-201ENST00000445695 655 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 RPL23AP35-201ENST00000451906 501 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3□□□□□ -1.93
ZNF560Q96MR9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZNF560Q96MR9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3□□□□□ -1.93
ZNF560Q96MR9 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3□□□□□ -1.93
ZNF560Q96MR9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZNF560Q96MR9 AL133271.1-201ENST00000538229 291 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms