Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MIR7641-1-201ENST00000627518 61 ntBASIC2.84□□□□□ -1.95
LINC00479Q96M42 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.84□□□□□ -1.95
LINC00479Q96M42 U6.98-201ENST00000637157 84 ntBASIC2.84□□□□□ -1.95
LINC00479Q96M42 CKAP2P1-201ENST00000555477 2049 ntBASIC2.84□□□□□ -1.95
LINC00479Q96M42 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00479Q96M42 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LINC00479Q96M42 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
LINC00479Q96M42 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC00479Q96M42 MTND4P12-201ENST00000498999 1377 ntBASIC2.84□□□□□ -1.96
LINC00479Q96M42 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LINC00479Q96M42 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.84□□□□□ -1.96
LINC00479Q96M42 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LINC00479Q96M42 AL354685.2-201ENST00000448218 1447 ntBASIC2.84□□□□□ -1.96
LINC00479Q96M42 ZNF826P-207ENST00000622273 1910 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 MTCO1P24-201ENST00000515438 1558 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 MIR558-201ENST00000384920 94 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 RNU6-278P-201ENST00000390945 109 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 RNU6-754P-201ENST00000391166 107 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 UBE2V1P2-201ENST00000397758 440 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AL354719.1-201ENST00000406535 843 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 Y_RNA.625-201ENST00000411256 107 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AL691449.1-201ENST00000426570 421 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 OR2AS1P-201ENST00000427827 319 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC114755.5-201ENST00000447760 831 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 RPS20P20-201ENST00000460498 340 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 RPS23P7-201ENST00000466210 444 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC105137.1-201ENST00000484355 562 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC025465.4-201ENST00000513422 638 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 RNU6-1095P-201ENST00000516148 108 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC093331.1-201ENST00000521474 169 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 OR4R1P-201ENST00000529879 463 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 OR5B10P-201ENST00000532869 642 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 RAB11AP2-201ENST00000545905 639 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC123904.3-201ENST00000547218 814 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 HMGB1P6-201ENST00000569046 646 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 IPO5P1-202ENST00000600039 287 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 SNORA62.6-201ENST00000606322 83 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AL450472.3-201ENST00000615578 367 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC010338.1-201ENST00000621823 717 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC005609.4-201ENST00000625071 447 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 MIR7153-201ENST00000637758 57 ntBASIC2.83□□□□□ -1.96
LINC00479Q96M42 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LINC00479Q96M42 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.83□□□□□ -1.96
LINC00479Q96M42 AC090229.1-201ENST00000590983 1609 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC00479Q96M42 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC00479Q96M42 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC00479Q96M42 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC00479Q96M42 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LINC00479Q96M42 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.82□□□□□ -1.96
LINC00479Q96M42 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC00479Q96M42 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC00479Q96M42 RNA5SP235-201ENST00000365411 114 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.82□□□□□ -1.96
LINC00479Q96M42 RNU6-637P-201ENST00000384050 107 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LINC00479Q96M42 RPL32P23-201ENST00000397237 405 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 MIR1250-201ENST00000408098 113 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 RNU2-62P-201ENST00000410868 191 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 RNU6-1148P-201ENST00000410992 104 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.82□□□□□ -1.96
LINC00479Q96M42 UBE2FP1-201ENST00000416536 447 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 RPL21P111-201ENST00000418453 477 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 RPS15AP6-201ENST00000420703 385 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 ZNF863P-201ENST00000426746 417 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 AC137499.1-201ENST00000427602 88 ntBASIC2.82□□□□□ -1.96
LINC00479Q96M42 AC079780.1-201ENST00000428259 207 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms