Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 AC138393.1-203ENST00000327086 343 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 SNORA70.2-201ENST00000364506 135 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 RNU1-115P-201ENST00000365329 160 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 Y_RNA.428-201ENST00000384078 102 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 RNU6-45P-201ENST00000384471 107 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 RN7SKP100-201ENST00000411258 284 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC011933.1-201ENST00000413334 321 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 RPL35AP21-201ENST00000437667 333 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 RPL12P20-201ENST00000475538 479 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC092436.3-201ENST00000511788 257 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC104136.1-201ENST00000512969 394 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC009852.2-201ENST00000567898 485 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 MYL12BP1-201ENST00000569826 507 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 MIR4277-201ENST00000578298 84 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 MIR5096-201ENST00000583713 70 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 AC092447.9-201ENST00000603395 144 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 MIR6853-201ENST00000619642 74 ntBASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1AQ96AJ9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC091812.1-201ENST00000432235 1948 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 Y_RNA.2-201ENST00000362330 96 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 RNU6-288P-201ENST00000363690 104 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 RNU6-266P-201ENST00000364225 107 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 RNU6-450P-201ENST00000364654 107 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 Y_RNA.476-201ENST00000384347 108 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 Y_RNA.485-201ENST00000384395 102 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AL590399.6-201ENST00000446396 307 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 H2AFZP5-201ENST00000446960 382 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 CEACAMP6-201ENST00000452007 574 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 CECR9-201ENST00000453421 199 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AURKAPS2-201ENST00000454983 333 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 HMGB3P30-201ENST00000457863 606 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC084198.1-201ENST00000477747 402 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC010655.3-201ENST00000478818 450 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC012158.1-204ENST00000483430 465 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 RNU4-60P-201ENST00000517239 135 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC009812.2-201ENST00000517657 457 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC091516.1-201ENST00000549191 703 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 NOL8P1-201ENST00000508336 3529 ntBASIC5.54□□□□□ -1.52
VTI1AQ96AJ9 Y_RNA.389-201ENST00000383924 113 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 RNU6-214P-201ENST00000384130 107 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 RNU6-842P-201ENST00000384269 107 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 SNORA77-201ENST00000408716 125 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 RNU6-712P-201ENST00000410558 100 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 AC093414.1-201ENST00000434712 514 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 RPS11P1-201ENST00000451072 473 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 RNU7-187P-201ENST00000458985 68 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 ENPP7P9-201ENST00000514456 627 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 GNAI2P1-201ENST00000541815 315 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 OR4H12P-201ENST00000556269 907 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 AP005432.2-201ENST00000608162 586 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 AC067931.1-201ENST00000624190 671 ntBASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
VTI1AQ96AJ9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 THAP12P5-201ENST00000405864 2275 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 MRPS18CP6-201ENST00000423587 223 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 AC005154.2-201ENST00000438110 379 ntBASIC5.52□□□□□ -1.53
VTI1AQ96AJ9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms