Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.22□□□□□ -1.73
HPS3Q969F9 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HPS3Q969F9 MFSD8-236ENST00000641509 4050 ntBASIC4.22□□□□□ -1.73
HPS3Q969F9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HPS3Q969F9 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS3Q969F9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 RNY4P14-201ENST00000363656 96 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 RNU6-74P-201ENST00000384235 107 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 MIR30B-201ENST00000384850 88 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RPS4XP8-201ENST00000402039 771 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RNU2-9P-201ENST00000410194 145 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RNU2-71P-201ENST00000411395 189 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RPL7P2-201ENST00000427639 268 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AL139415.2-201ENST00000431968 163 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RPL36AP6-201ENST00000435770 321 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.21□□□□□ -1.74
HPS3Q969F9 BNIP3P2-201ENST00000441221 577 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.21□□□□□ -1.74
HPS3Q969F9 FGF7P6-202ENST00000451282 293 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS3Q969F9 RNU7-170P-201ENST00000459303 61 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC126389.1-201ENST00000477436 290 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC092451.1-201ENST00000480211 153 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AC026427.2-201ENST00000506228 536 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.21□□□□□ -1.74
HPS3Q969F9 RNU2-58P-201ENST00000516403 183 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 RNA5SP143-201ENST00000516936 115 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.21□□□□□ -1.74
HPS3Q969F9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.21□□□□□ -1.74
HPS3Q969F9 NCAPGP2-201ENST00000557911 754 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 MED28P6-201ENST00000558776 231 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 MIR3921-201ENST00000577308 85 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 SNORA59B-202ENST00000578183 701 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AC006130.2-201ENST00000586202 326 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 SNORA62.6-201ENST00000606322 83 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AP002826.1-201ENST00000608835 315 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC006023.2-201ENST00000609916 167 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.21□□□□□ -1.74
HPS3Q969F9 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 AC116096.1-201ENST00000566804 2314 ntBASIC4.21□□□□□ -1.74
HPS3Q969F9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HPS3Q969F9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.2□□□□□ -1.74
HPS3Q969F9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 RNA5SP322-201ENST00000363617 119 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 Y_RNA.248-201ENST00000364501 109 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 RNA5SP97-201ENST00000365006 84 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 Y_RNA.453-201ENST00000384223 109 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 SNORA36C-201ENST00000384289 132 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 RNU1-89P-201ENST00000384592 164 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 MRPL50P2-201ENST00000416821 482 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 USP9YP27-201ENST00000418455 438 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 ELOCP14-201ENST00000428070 331 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 ELOCP7-201ENST00000439968 331 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 DDX3P2-201ENST00000446138 111 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 CEACAMP4-201ENST00000457676 421 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AC034236.1-201ENST00000469891 373 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.2□□□□□ -1.74
HPS3Q969F9 RPL7P47-201ENST00000497299 556 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 HSPD1P15-201ENST00000505573 1122 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HPS3Q969F9 AL359273.1-201ENST00000510918 627 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.2□□□□□ -1.74
HPS3Q969F9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.2□□□□□ -1.74
HPS3Q969F9 AC109635.3-201ENST00000529536 185 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 OR5D17P-201ENST00000531492 978 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.2□□□□□ -1.74
HPS3Q969F9 AL355836.1-201ENST00000555951 870 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AC053481.4-201ENST00000583164 216 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.2□□□□□ -1.74
HPS3Q969F9 BDH2P1-201ENST00000602288 736 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AL137849.1-201ENST00000604767 169 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AL049634.3-201ENST00000604968 457 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 MIR486-1-201ENST00000612171 68 ntBASIC4.2□□□□□ -1.74
HPS3Q969F9 AC004696.1-201ENST00000614345 607 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms