Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL136372.1-201ENST00000403060 228 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNU2-36P-201ENST00000410361 191 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNA5SP107-201ENST00000411358 122 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RPL35AP12-201ENST00000425362 338 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RPL23AP46-201ENST00000438548 490 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AF228730.2-201ENST00000438784 848 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC007967.1-201ENST00000455422 1159 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.54□□□□□ -1.68
ERCC4Q92889 AC026979.1-201ENST00000492525 396 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC092436.1-201ENST00000506450 503 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC004062.1-201ENST00000509926 645 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.54□□□□□ -1.68
ERCC4Q92889 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.54□□□□□ -1.68
ERCC4Q92889 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.54□□□□□ -1.68
ERCC4Q92889 AC099522.1-202ENST00000514718 367 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNU4-29P-201ENST00000515943 174 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNU6-277P-201ENST00000516272 106 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 Y_RNA.675-201ENST00000516389 149 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNU6-1314P-201ENST00000517139 104 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 DEFB108D-201ENST00000527787 222 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.54□□□□□ -1.68
ERCC4Q92889 AC078814.3-201ENST00000553036 491 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.54□□□□□ -1.68
ERCC4Q92889 MIR5684-201ENST00000585074 65 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC4Q92889 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC4Q92889 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.54□□□□□ -1.68
ERCC4Q92889 MIR486-1-201ENST00000612171 68 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC083809.1-201ENST00000615051 472 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AL603758.1-201ENST00000618654 241 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC079684.1-201ENST00000621405 437 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.54□□□□□ -1.68
ERCC4Q92889 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ERCC4Q92889 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ERCC4Q92889 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ERCC4Q92889 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
ERCC4Q92889 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
ERCC4Q92889 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
ERCC4Q92889 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ERCC4Q92889 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ERCC4Q92889 MTND4P35-201ENST00000604257 1375 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
ERCC4Q92889 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC4Q92889 BDP1P-201ENST00000582658 1990 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC4Q92889 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC4Q92889 RNU6-637P-201ENST00000384050 107 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RNU6-38P-201ENST00000384085 107 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RNU6-510P-201ENST00000391239 108 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AL109755.1-201ENST00000401791 649 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC4Q92889 DUTP6-201ENST00000425573 462 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RPS27AP12-201ENST00000429552 465 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AC087650.1-201ENST00000431445 468 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AL365400.1-201ENST00000431854 640 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 ERLEC1P1-201ENST00000433806 578 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.53□□□□□ -1.68
ERCC4Q92889 RNA5SP246-201ENST00000458909 119 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RNU6-333P-201ENST00000459117 107 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RN7SL385P-201ENST00000468873 276 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RPL23AP11-201ENST00000475260 469 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 PPIAP15-201ENST00000479662 484 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC4Q92889 RPL7P23-201ENST00000493874 747 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 Y_RNA.701-201ENST00000516812 110 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RNU7-30P-201ENST00000516835 62 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 RNU4-60P-201ENST00000517239 135 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 NARSP2-201ENST00000518524 679 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AC100870.1-201ENST00000522035 505 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC4Q92889 FAM60DP-201ENST00000524174 632 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ERCC4Q92889 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC011611.1-201ENST00000552179 197 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 PSMA3P-201ENST00000555485 635 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC022968.1-201ENST00000567372 442 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC024619.4-201ENST00000580924 316 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 MIR4697-201ENST00000582977 78 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.53□□□□□ -1.68
ERCC4Q92889 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC006254.3-201ENST00000603353 884 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AL050343.2-201ENST00000607338 280 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.53□□□□□ -1.68
ERCC4Q92889 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.53□□□□□ -1.68
ERCC4Q92889 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.53□□□□□ -1.68
ERCC4Q92889 MTND5P3-201ENST00000438536 1800 ntBASIC4.53□□□□□ -1.68
ERCC4Q92889 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC4Q92889 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.53□□□□□ -1.68
ERCC4Q92889 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC4Q92889 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
ERCC4Q92889 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC4Q92889 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms