Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
TOPBP1Q92547 DDX10P1-201ENST00000448545 1933 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 RNU6-819P-201ENST00000364116 107 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
TOPBP1Q92547 RNU6-1181P-201ENST00000384191 106 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 MIR520E-201ENST00000384867 87 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 AC010385.1-201ENST00000412374 256 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.31□□□□□ -2.04
TOPBP1Q92547 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.31□□□□□ -2.04
TOPBP1Q92547 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
TOPBP1Q92547 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.31□□□□□ -2.04
TOPBP1Q92547 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.31□□□□□ -2.04
TOPBP1Q92547 XKRYP6-201ENST00000440468 1116 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 XKRYP3-201ENST00000442113 1116 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 AL035407.2-201ENST00000454090 378 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 HMGN2P13-201ENST00000476476 274 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 RPS29P20-201ENST00000489592 171 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 AC133963.2-201ENST00000513686 578 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 AF279873.1-201ENST00000523393 313 ntBASIC2.31□□□□□ -2.04
TOPBP1Q92547 AL357078.2-201ENST00000416486 427 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.3□□□□□ -2.04
TOPBP1Q92547 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.3□□□□□ -2.04
TOPBP1Q92547 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TOPBP1Q92547 SYPL1P1-201ENST00000473622 768 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 AP001804.3-201ENST00000525146 880 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.3□□□□□ -2.04
TOPBP1Q92547 AC074029.2-201ENST00000551045 634 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TOPBP1Q92547 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC2.3□□□□□ -2.04
TOPBP1Q92547 MIR4285-201ENST00000581001 85 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 MIR4448-201ENST00000584360 86 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.3□□□□□ -2.04
TOPBP1Q92547 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.3□□□□□ -2.04
TOPBP1Q92547 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TOPBP1Q92547 AL109653.1-201ENST00000603091 248 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 AC008121.3-201ENST00000618726 433 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 MIR6788-201ENST00000618842 66 ntBASIC2.3□□□□□ -2.04
TOPBP1Q92547 MIR320A-201ENST00000385302 82 ntBASIC2.29□□□□□ -2.04
TOPBP1Q92547 SNORA40.6-201ENST00000391153 128 ntBASIC2.29□□□□□ -2.04
TOPBP1Q92547 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC090774.1-201ENST00000435925 246 ntBASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC010301.1-201ENST00000473936 355 ntBASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.29□□□□□ -2.04
TOPBP1Q92547 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.29□□□□□ -2.04
TOPBP1Q92547 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC002487.1-201ENST00000604565 994 ntBASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC006249.1-201ENST00000621223 471 ntBASIC2.29□□□□□ -2.04
TOPBP1Q92547 AC121333.1-201ENST00000567488 2709 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 Y_RNA.30-201ENST00000362572 97 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 SNORD114-27-201ENST00000363766 70 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 RNA5SP492-201ENST00000411330 114 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 MTCYBP24-201ENST00000420387 1106 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 KATNBL1P3-201ENST00000443475 909 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 HMGN2P18-201ENST00000450680 270 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 RPS3AP22-201ENST00000488297 769 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 AC025459.1-201ENST00000504072 156 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 RNA5SP468-201ENST00000516782 93 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TOPBP1Q92547 AC011477.1-204ENST00000623416 1325 ntBASIC2.28□□□□□ -2.04
TOPBP1Q92547 RNU6-50P-201ENST00000362356 103 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 RNU4-23P-201ENST00000362839 140 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TOPBP1Q92547 RNU1-109P-201ENST00000383960 147 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 TPMTP3-201ENST00000411928 735 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 MTCO1P4-201ENST00000520516 1409 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC009268.1-201ENST00000561352 1203 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 AL590282.1-201ENST00000610379 1136 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC083806.3-201ENST00000614016 455 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 PABPC1P7-201ENST00000413177 1513 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 PRRC2CP1-201ENST00000404428 159 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 RNU4-65P-201ENST00000410473 140 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC073264.1-201ENST00000411508 416 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 SUMO1P4-201ENST00000429430 302 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 GTF2IP7-202ENST00000436677 309 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 RPL7P29-201ENST00000437151 728 ntBASIC2.27□□□□□ -2.05
TOPBP1Q92547 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.27□□□□□ -2.05
TOPBP1Q92547 MTCO3P35-201ENST00000485582 781 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms