Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 RPL7P46-201ENST00000425129 740 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 C1DP1-201ENST00000426049 402 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 CKS1BP5-201ENST00000434172 273 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 PTENP1-201ENST00000447117 1215 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AL589880.1-201ENST00000448271 287 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC008837.2-201ENST00000513076 418 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 RNU6-27P-201ENST00000516146 107 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 SLC2A13P1-201ENST00000531560 322 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC026464.5-201ENST00000562497 722 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC107954.1-201ENST00000565906 727 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 MTND3P19-201ENST00000603825 345 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AL355816.2-201ENST00000610049 647 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AL050303.3-201ENST00000613704 284 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC091046.2-201ENST00000620775 665 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SHROOM3Q8TF72 DCAF13P1-201ENST00000495256 1330 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 Y_RNA.25-201ENST00000362528 102 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNU6-251P-201ENST00000363235 104 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 Y_RNA.408-201ENST00000383987 102 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 SNORD65.1-201ENST00000390889 71 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNU4-62P-201ENST00000410125 130 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNU4-22P-201ENST00000411058 166 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC006548.1-201ENST00000427470 102 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 CR769776.1-201ENST00000441254 787 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RPL23AP33-201ENST00000442301 452 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AL034418.1-201ENST00000448675 860 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 PNPLA4P1-201ENST00000458328 305 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC104472.2-201ENST00000469035 601 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 KLRA1P-201ENST00000503499 986 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC026414.1-201ENST00000504046 698 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC079395.1-201ENST00000510981 262 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 HMGN1P28-201ENST00000521340 364 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 NDUFA5P6-201ENST00000542110 379 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AP005136.1-201ENST00000579765 429 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 LRRC37A5P-203ENST00000580181 585 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MTCO2P2-201ENST00000591258 225 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC016877.3-201ENST00000606778 504 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC005332.6-201ENST00000613178 446 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC107075.1-201ENST00000613695 314 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MIR6864-201ENST00000617935 70 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC098679.5-201ENST00000624394 571 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 CR381572.1-201ENST00000625098 102 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC093591.3-201ENST00000634516 308 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC022336.2-201ENST00000568966 2538 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNA5SP189-201ENST00000364920 115 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 SNORA51.12-201ENST00000384448 134 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MIR591-201ENST00000385290 95 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 DSTNP4-201ENST00000399472 474 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AL136310.1-201ENST00000404926 654 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 LUZP4P1-201ENST00000415420 344 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AL353729.1-201ENST00000425044 720 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 PSMA2P3-201ENST00000429685 675 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MTND2P5-201ENST00000432656 1006 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC093392.2-201ENST00000450682 337 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MTND1P16-201ENST00000465177 898 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC108734.3-201ENST00000481241 1165 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC069528.1-202ENST00000482888 637 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNU6-202P-201ENST00000515998 96 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC023632.1-201ENST00000518463 375 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MTATP6P24-201ENST00000576835 677 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 BNIP3P24-201ENST00000593398 557 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 LLPHP1-201ENST00000603571 367 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 AC245517.5-201ENST00000611529 162 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MKKS-204ENST00000639674 192 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 LINC02211-204ENST00000642024 1070 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MTND5P29-201ENST00000458676 1807 ntBASIC2.12□□□□□ -2.07
SHROOM3Q8TF72 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms