Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHKBP1Q8TBC3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHKBP1Q8TBC3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SHKBP1Q8TBC3 AC008079.2-201ENST00000623543 20396 ntBASIC4.96□□□□□ -1.62
SHKBP1Q8TBC3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 RNU6-545P-201ENST00000362681 104 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 Y_RNA.577-201ENST00000384794 101 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 ELOCP19-201ENST00000411919 318 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 RPL23AP38-201ENST00000423801 469 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 MYL8P-204ENST00000431574 518 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 AL133396.1-201ENST00000432048 687 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 AC005094.1-201ENST00000440420 368 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 RPL36AP13-201ENST00000457490 317 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 LINC01399-202ENST00000458450 244 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 AC005912.1-201ENST00000495392 255 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 RPL23AP55-201ENST00000498163 452 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 HMGB1P21-201ENST00000502313 581 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 AL138889.2-201ENST00000603883 242 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 EIF2AP4-201ENST00000424793 1781 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 EXOC5P1-201ENST00000510543 1969 ntBASIC4.95□□□□□ -1.62
SHKBP1Q8TBC3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 RNA5SP447-201ENST00000363749 119 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 SNORA70.2-201ENST00000364506 135 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 RNU6-1226P-201ENST00000384317 107 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 RNU6-434P-201ENST00000384376 107 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 Y_RNA.506-201ENST00000384494 102 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 SNORD58.1-201ENST00000391313 66 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 RNA5SP36-201ENST00000410197 133 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 RNU6-1156P-201ENST00000410365 100 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC007738.1-201ENST00000413892 348 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC140479.3-201ENST00000418944 1126 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 MTCO3P29-201ENST00000432119 779 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL645568.3-201ENST00000433683 316 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC098831.1-201ENST00000440661 216 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 NEFMP1-201ENST00000443423 1006 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 TMSB4XP3-201ENST00000445144 114 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL353691.1-201ENST00000451332 387 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC079168.2-201ENST00000453977 416 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL591473.1-201ENST00000464297 313 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 CYCSP27-201ENST00000527643 293 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC109446.1-201ENST00000566172 220 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC006600.1-201ENST00000572529 153 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AC006557.5-201ENST00000603126 811 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL356218.2-201ENST00000605264 187 ntBASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SHKBP1Q8TBC3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 RNY3P11-201ENST00000364153 102 ntBASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 RNU4-50P-201ENST00000364361 141 ntBASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 RNU6-214P-201ENST00000384130 107 ntBASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 RNU6-729P-201ENST00000384399 107 ntBASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 Y_RNA.526-201ENST00000384572 110 ntBASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 RN7SKP267-201ENST00000410381 285 ntBASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.93□□□□□ -1.62
SHKBP1Q8TBC3 EZH2P1-201ENST00000431167 291 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms