Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MTND5P33-201ENST00000571250 1450 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AL445189.1-201ENST00000405722 338 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MIR548P-201ENST00000408336 84 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MIR1911-201ENST00000410783 80 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 NDUFB4P5-201ENST00000415445 361 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 TOMM22P1-201ENST00000418578 312 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 RPS15AP12-201ENST00000419498 388 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AL645937.1-202ENST00000421799 937 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC010655.1-201ENST00000449336 292 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC006480.1-201ENST00000449887 378 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 SNORD19B-201ENST00000459623 84 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MTCO2P29-201ENST00000465212 189 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 VN1R104P-201ENST00000505115 1009 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC017037.2-201ENST00000513850 890 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC026801.2-201ENST00000515352 425 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 SCARNA24.1-201ENST00000516465 137 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP337-201ENST00000517007 109 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 OR4T1P-201ENST00000554933 911 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC007151.1-201ENST00000572774 483 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC098848.2-201ENST00000588023 330 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC090971.5-201ENST00000621102 293 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 AC008785.1-201ENST00000624475 456 ntBASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SIMC1Q8NDZ2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 OR5P1P-201ENST00000299512 925 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.128-201ENST00000363391 112 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.315-201ENST00000365117 102 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 RNU6-996P-201ENST00000365438 107 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.387-201ENST00000383918 102 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 SNORD66.1-201ENST00000391230 76 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 VN1R36P-201ENST00000414936 291 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 RPL35AP22-201ENST00000436855 335 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC079781.2-201ENST00000446424 169 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 HMGB3P22-202ENST00000451823 572 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC104308.1-201ENST00000454621 333 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 RPL23AP31-201ENST00000456160 467 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AL356010.1-201ENST00000456364 102 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 HMGN2P26-201ENST00000463169 339 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AL163973.1-201ENST00000484753 577 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 RPL23AP55-201ENST00000498163 452 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC020593.1-201ENST00000507399 299 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP468-201ENST00000516782 93 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 FAM60BP-201ENST00000578364 658 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC006504.6-201ENST00000590142 199 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AL355802.3-201ENST00000607571 545 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC011460.1-201ENST00000636268 1834 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AL133383.2-201ENST00000622958 2336 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AC008725.1-201ENST00000605123 2263 ntBASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SIMC1Q8NDZ2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 AC009902.3-201ENST00000606235 2172 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 Y_RNA.216-201ENST00000364205 93 ntBASIC4.05□□□□□ -1.76
SIMC1Q8NDZ2 RNA5SP515-201ENST00000364570 118 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms