Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL603758.1-201ENST00000618654 241 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AL607023.1-201ENST00000620045 248 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC073308.1-201ENST00000623696 305 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC079228.1-201ENST00000624774 1049 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AC004972.1-201ENST00000623934 2209 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AP003122.5-201ENST00000527668 3766 ntBASIC3.13□□□□□ -1.91
RTL3Q8N8U3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL3Q8N8U3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 SNORA46-201ENST00000384762 135 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 MIR320C1-201ENST00000408566 88 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC083875.1-201ENST00000419509 405 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 EEF1E1P1-201ENST00000446998 430 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 MTND4LP3-201ENST00000468320 276 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC114967.1-201ENST00000504890 259 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 LTV1P1-201ENST00000510683 1237 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 TTC39CP1-201ENST00000512513 755 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 RNU6-928P-201ENST00000516876 104 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AL355836.1-201ENST00000555951 870 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AP005136.1-201ENST00000579765 429 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 BNIP3P22-201ENST00000593399 556 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 Z94722.1-201ENST00000604328 474 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AC079597.1-201ENST00000624306 508 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RTL3Q8N8U3 AL445523.1-201ENST00000451184 1362 ntBASIC3.12□□□□□ -1.91
RTL3Q8N8U3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC245054.2-201ENST00000415639 319 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 ARPC3P1-201ENST00000437218 533 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 RPS3AP12-201ENST00000443616 753 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AL671855.1-201ENST00000446875 1203 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 MTND3P7-201ENST00000474435 343 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 HMGB1P36-201ENST00000487709 576 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 SNORA31.21-201ENST00000517180 77 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 SNORA70.24-201ENST00000517233 118 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC068657.1-201ENST00000520807 306 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AL596327.1-201ENST00000603629 213 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC064807.4-201ENST00000607201 407 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.11□□□□□ -1.91
RTL3Q8N8U3 PCMTD1P7-201ENST00000634506 357 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC092435.3-201ENST00000565538 3654 ntBASIC3.11□□□□□ -1.91
RTL3Q8N8U3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL035425.3-201ENST00000564206 4996 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 MIR422A-201ENST00000362286 90 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 SNORA71.1-201ENST00000364523 117 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 SNORA23-201ENST00000365128 182 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 U3.20-201ENST00000390909 217 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL031577.2-201ENST00000404133 280 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RNA5SP274-201ENST00000410484 108 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 MTND1P21-201ENST00000412991 285 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC129850.1-201ENST00000436203 508 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 RPL35AP22-201ENST00000436855 335 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 MTND2P4-201ENST00000445034 1004 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
RTL3Q8N8U3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.1□□□□□ -1.91
RTL3Q8N8U3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms