Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 DEFB131E-202ENST00000602581 683 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL606834.2-201ENST00000602954 668 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC007179.3-201ENST00000604976 235 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AP000860.1-201ENST00000605250 559 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AC103710.2-201ENST00000609912 942 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 SNHG22-203ENST00000617833 660 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 MTND4P5-201ENST00000435821 1374 ntBASIC3.33□□□□□ -1.88
BEST3Q8N1M1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
BEST3Q8N1M1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RNA5SP72-201ENST00000364442 117 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC110754.1-201ENST00000399740 601 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AL159169.1-201ENST00000421119 127 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RPL21P109-201ENST00000422213 475 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 USP12PX-201ENST00000432383 1057 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 OR2B8P-201ENST00000432841 938 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 C1DP4-201ENST00000455429 424 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RPS27AP1-201ENST00000475545 471 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC004924.1-201ENST00000480160 781 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RPL9P33-201ENST00000484311 566 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC074250.1-201ENST00000511117 192 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 FTH1P9-201ENST00000513251 355 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 RNU6-840P-201ENST00000517275 65 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC103843.2-201ENST00000530523 682 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 OR4H12P-201ENST00000556269 907 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 MIR3690-201ENST00000580266 75 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC004492.1-201ENST00000607036 742 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 FRG1KP-201ENST00000623592 341 ntBASIC3.32□□□□□ -1.88
BEST3Q8N1M1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BEST3Q8N1M1 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 OR5J1P-201ENST00000313544 939 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 SNORD56.2-201ENST00000363242 71 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RNU6-511P-201ENST00000363496 107 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RNU6-169P-201ENST00000365336 107 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 MIR490-201ENST00000384865 128 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RN7SKP285-201ENST00000410137 318 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 Y_RNA.619-201ENST00000410951 90 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC002075.2-201ENST00000425207 252 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RPS3AP44-201ENST00000425466 790 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC017083.1-201ENST00000428093 483 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 FCF1P1-201ENST00000432690 571 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC092473.1-201ENST00000441098 221 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AL662791.1-201ENST00000441992 928 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC132479.1-201ENST00000449160 144 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 ANP32BP2-201ENST00000454525 545 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 SNORD97-201ENST00000459187 142 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RPL21P104-201ENST00000464143 478 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 VN1R17P-201ENST00000472048 1090 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 HMGB1P29-201ENST00000505659 499 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms