Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 HIF1AP1-201ENST00000553642 175 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.44□□□□□ -1.86
USP43Q70EL4 MIR3944-201ENST00000581277 108 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 MIR3171-201ENST00000584270 74 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 KLKP1-201ENST00000595979 403 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC006006.1-201ENST00000603082 144 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC136443.5-201ENST00000603741 370 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AL391646.1-201ENST00000603860 190 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 RNA5SP108-201ENST00000605921 117 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 MIR6875-201ENST00000617506 72 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 AC005858.4-201ENST00000623191 700 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 PISRT1-201ENST00000626175 531 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
USP43Q70EL4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.44□□□□□ -1.86
USP43Q70EL4 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.44□□□□□ -1.86
USP43Q70EL4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
USP43Q70EL4 AF127577.6-201ENST00000623352 2191 ntBASIC3.44□□□□□ -1.86
USP43Q70EL4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP43Q70EL4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP43Q70EL4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP43Q70EL4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC007823.1-201ENST00000569932 1566 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP43Q70EL4 RNA5SP130-201ENST00000364431 114 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RNU6-474P-201ENST00000384243 107 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RNU6-784P-201ENST00000384330 106 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 MIR200C-201ENST00000384980 68 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 MIR449B-201ENST00000384995 97 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 HMGB1P17-201ENST00000403495 628 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RPL21P65-201ENST00000406094 466 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RPS7P15-201ENST00000415804 584 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 OR1AA1P-201ENST00000419597 916 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AL445669.1-201ENST00000426743 755 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AL035410.1-201ENST00000427409 427 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 RANP8-201ENST00000444720 713 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 ARPC3P5-201ENST00000448802 534 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC140076.1-201ENST00000449897 361 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 PPIAP3-201ENST00000450588 505 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 Z82190.1-201ENST00000454534 490 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 RPS20P32-201ENST00000456044 356 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 BTF3P5-201ENST00000457252 467 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 RPS15AP1-201ENST00000457423 391 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RPS20P20-201ENST00000460498 340 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC084198.1-201ENST00000477747 402 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RPS3AP50-201ENST00000487064 803 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC106872.3-201ENST00000495104 446 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 RNU6-264P-201ENST00000517134 104 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 RNU6-794P-201ENST00000517261 64 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.43□□□□□ -1.86
USP43Q70EL4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AL359212.1-201ENST00000556608 614 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 TGIF1P1-201ENST00000558095 802 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 AL137849.1-201ENST00000604767 169 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AL136363.1-201ENST00000605349 337 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AC004908.2-201ENST00000609090 574 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 AL603758.1-201ENST00000618654 241 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 MTND5P16-201ENST00000460269 1703 ntBASIC3.43□□□□□ -1.86
USP43Q70EL4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
USP43Q70EL4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.43□□□□□ -1.86
USP43Q70EL4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP43Q70EL4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP43Q70EL4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AL079305.1-201ENST00000623159 3008 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 GABPAP-201ENST00000419271 1356 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.42□□□□□ -1.86
USP43Q70EL4 Y_RNA.1-201ENST00000352915 104 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 Y_RNA.431-201ENST00000384086 102 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AL121972.1-201ENST00000402023 252 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AL122016.1-201ENST00000403365 367 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AL136116.1-201ENST00000403591 381 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
USP43Q70EL4 RNU2-28P-201ENST00000410457 189 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 SNRPEP10-201ENST00000420249 274 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 PIGFP2-201ENST00000421400 651 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AL353193.1-201ENST00000421444 268 ntBASIC3.42□□□□□ -1.86
USP43Q70EL4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.42□□□□□ -1.86
USP43Q70EL4 AC018630.2-202ENST00000422992 927 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms